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Record W2153974097 · doi:10.1136/gut.2010.226779

The microbiota–gut–brain axis: learning from intestinal bacteria?

2011· letter· en· W2153974097 on OpenAlexaff
Přemysl Berčík

Bibliographic record

VenueGut · 2011
Typeletter
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGut microbiota and health
Canadian institutionsMcMaster UniversityPopulation Health Research Institute
Fundersnot available
KeywordsGut–brain axisIntestinal bacteriaBacteriaMicrobiologyGut bacteriaGut floraBiologyMedicineImmunologyGenetics

Abstract

fetched live from OpenAlex

The intestinal microbiota is a diverse and dynamic ecosystem,1 which has developed a mutualistic relationship with its host and plays a crucial role in the development of the host's innate and adaptive immune responses.2 This ecosystem serves the host by protecting against pathogens, harvesting otherwise inaccessible nutrients, aiding in neutralisation of drugs and carcinogens, and affecting the metabolism of lipids.3 Gut bacteria modulate intestinal motility, barrier function and visceral perception.4 An interaction between the intestinal microbiota and the central nervous system (CNS) may seem difficult to conceive at first sight, but clinicians are well aware of the benefit of oral antibiotics and laxatives in the treatment of hepatic encephalopathy.5 Data accumulated from animal studies indicate that there is central sensing of gastrointestinal infections. For example, acute infection with Campylobacter jejuni results in anxiety-like behaviour and rapid activation of vagal pathways prior to onset of immune responses,6 while chronic Helicobacter pylori infection in mice leads to abnormal feeding behaviour and upregulation of tumour necrosis factor α (TNFα) in the median eminence of the hypothalamus.7 Rapid and sustained gut–brain communication may confer a significant advantage to the host, as central activation in response to changes in commensals or pathogens would allow better control of gut function and immunity. How does the intestinal microbiota …

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.003
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Commentary · Consensus signal: Commentary
Teacher disagreement score0.016
Threshold uncertainty score0.014

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.003
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0000.000
Science and technology studies0.0010.002
Scholarly communication0.0010.003
Open science0.0010.001
Research integrity0.0160.012
Insufficient payload (model declined to judge)0.0040.003

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.016
GPT teacher head0.232
Teacher spread0.216 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreCommentary

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations85
Published2011
Admission routes1
Has abstractyes

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