Lethal Necrotizing Pneumonia Caused by an ST398<i>Staphylococcus aureus</i>Strain
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Bibliographic record
Abstract
To the Editor: Several recent studies have shown massive colonization of livestock (especially pigs) and livestock workers by methicillin-resistant Staphylococcus aureus (MRSA) in western Europe, Canada, and the United States (1,2). Livestock MRSA isolates belong almost exclusively to a single sequence type, ST398. Evidence of zoonotic and interhuman transmission of methicillin-resistant and methicillin-susceptible variants of this hitherto unusual sequence type was recently reported (1,3). S. aureus ST398 infections in humans with or without a history of contact with livestock include bacteremia, endocarditis, ventilator-associated pneumonia, and wound infections, none of which involve the expression of specific toxins. Indeed, ST398 isolates are negative for all major virulence factors, with the exception of some rare isolates that harbor the genes that encode the Panton-Valentine leukocidin (PVL) (1), a toxin that is usually associated with community-acquired MRSA (4). We report a case of lethal necrotizing pneumonia caused by a PVL-positive methicillin-susceptible ST398 S. aureus isolate. A previously healthy 14-year-old girl came to the emergency room with influenza-like illness, cough, fever, and a 2-day history of severe abdominal pain. She was given intravenous antibacterial chemotherapy with cefotaxime and amikacin. An exploratory laparotomy showed no signs of abdominal disease. Immediately after surgery, acute respiratory distress syndrome with hemodynamic instability developed in the patient; mechanical ventilation and inotropic support were required. A chest radiograph showed bilateral pulmonary infiltrates and pleural effusion. S. aureus was isolated by bronchoalveolar lavage fluid and blood culture, and staphylococcal necrotizing pneumonia was diagnosed. Clinical features, including the preceding influenza-like illness, were highly consistent with those previously reported (5). However, viral cultures and immunofluorescence assays were negative for all common respiratory viruses, and, although the patient had positive serologic test results for influenza B virus, antibody titers were too low to affirm influenza B infection. Severity factors were present (5), including leukopenia, airway bleeding, and multiorgan failure. She died 6 days after symptom onset, with refractory shock and respiratory failure caused by bilateral pneumothorax. The S. aureus strain, which was susceptible to all tested antimicrobial agents except macrolides, was agr1/ST398, spa-type t571 and nontypeable by SmaI pulsed-field gel electrophoresis, which showed its relatedness to livestock-associated strains. The origin of the infection could not be determined. The presence of the genes encoding PVL was confirmed by PCR. Thus, the spread of S. aureus ST398 among livestock is a matter of increasing concern because strains of this sequence type were able to acquire PVL genes and cause necrotizing pneumonia in a young immunocompetent patient. Transmission control and surveillance efforts are urgently needed to prevent further spread of such strains.
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Full frame distilled prediction
Teacher imitationNot calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.
Codex and Gemma teacher scores by category
| Category | Codex | Gemma |
|---|---|---|
| Metaresearch | 0.000 | 0.001 |
| Meta-epidemiology (narrow) | 0.001 | 0.002 |
| Meta-epidemiology (broad) | 0.002 | 0.001 |
| Bibliometrics | 0.001 | 0.001 |
| Science and technology studies | 0.001 | 0.001 |
| Scholarly communication | 0.000 | 0.000 |
| Open science | 0.001 | 0.000 |
| Research integrity | 0.003 | 0.008 |
| Insufficient payload (model declined to judge) | 0.001 | 0.000 |
Machine scores (provisional)
The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.
Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it