MétaCan
Menu
Back to cohort
Record W2155293648 · doi:10.1093/cid/civ314

Reply to Jackson

2015· letter· en· W2155293648 on OpenAlexaff
Karen C. Bloch, Ari Bitnun, Carol Glaser, Alexandra Mailles, J.‐P. Stahl, Allan R. Tunkel, Arun Venkatesan

Bibliographic record

VenueClinical Infectious Diseases · 2015
Typeletter
Languageen
FieldMedicine
TopicInfectious Encephalopathies and Encephalitis
Canadian institutionsUniversity of TorontoSickKids FoundationHospital for Sick Children
Fundersnot available
KeywordsMedicine

Abstract

fetched live from OpenAlex

10.1093/cid/civ313 To the Editor—We appreciate Dr Jackson's thoughtful comments regarding the diagnostic criteria for encephalitis proposed by the International Encephalitis Consortium (IEC) Working Group [1]. He raises concerns that (1) individual patients may have laboratory or pathologic evidence of encephalitis without meeting the clinical criteria specified in the IEC case definition, and (2) that patients with encephalitis and an additional cause for confusion or obtundation might be inappropriately excluded. The IEC case definition was developed as a tool for epidemiologic surveillance, research, and outbreak investigation. To identify patients prospectively, we believed that it was important to devise standardized criteria that relied on clinical aspects and initial laboratory testing, exclusive of results of diagnostic testing for specific etiologies. Furthermore, as no etiology is identified in approximately 50% of patients with encephalitis [2], the case definition was specifically formulated to be independent of causality. The case definition was not designed to be comprehensive and, as the article specifies, would not identify patients without altered mentation (eg, those with postvaricella cerebellar ataxia). Moreover, we stand by our emphasis on the importance of clinical manifestations of disease, as a positive test result may well represent a false positive or indicate prior or latent infection, in a patient who does not meet IEC case definition for encephalitis [3–9]. We agree with Dr Jackson that altered mental status is a common presentation for a number of conditions that mimic encephalitis. To maximize specificity, the IEC case definition excludes patients with alternative etiologies (eg, subarachnoid hemorrhage, urosepsis, and bacterial meningitis). This exclusionary criterion is only applicable when there is a clear-cut alternative diagnosis. Patients with depressed mentation and no alternative explanation, including those with metabolic derangements who do not normalize with correction of the abnormality, would meet the case definition for encephalitis assuming the requisite number of minor criteria were present. The IEC encephalitis case definition represents an attempt to standardize recognition of a poorly defined and ambiguous syndrome using evidence-based criteria in the existing literature. The case definition should be viewed as complementary to the diagnostic testing algorithm in the consensus statement and, for individual patients, clinical judgment should be applied. As additional data become available, the proposed case definition may be refined to optimize sensitivity and specificity. Potential conflicts of interest. All authors: No reported conflicts. All authors have submitted the ICMJE Form for Disclosure of Potential Conflicts of Interest. Conflicts that the editors consider relevant to the content of the manuscript have been disclosed.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.003
metaresearch head score (Gemma)0.027
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Commentary · Consensus signal: Commentary
Teacher disagreement score0.029
Threshold uncertainty score0.029

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0030.027
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0010.001
Science and technology studies0.0040.002
Scholarly communication0.0030.004
Open science0.0020.002
Research integrity0.0290.028
Insufficient payload (model declined to judge)0.0090.007

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.054
GPT teacher head0.369
Teacher spread0.315 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreCommentary

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations5
Published2015
Admission routes1
Has abstractyes

Explore more

Same venueClinical Infectious DiseasesSame topicInfectious Encephalopathies and EncephalitisFrench-language works237,207