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Record W2158682364 · doi:10.1371/journal.pbio.1001029

How Bird Necks Get Naked

2011· letter· en· W2158682364 on OpenAlexaff
Kira Heller

Bibliographic record

VenuePLoS Biology · 2011
Typeletter
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicSkin and Cellular Biology Research
Canadian institutionsWorkplace Health, Safety and Compensation Commission
Fundersnot available
KeywordsFeatherBiologyAppendageVertebrateEvolutionary biologyMost recent common ancestorAnatomyZoologyGeneticsPhylogenetics

Abstract

fetched live from OpenAlex

Some birds such as vultures, ostriches, and certain species of stork have naked necks. This unusual feature allows them to tolerate heat better in hot climates. And, for vultures, the absence of neck feathers helps them poke about the insides of carrion unimpeded. The fossil record provides no evidence that naked necks evolved in a common ancestor, leaving scientists to explore other avenues to understand how bird neck feathering could have been lost independently in several bird species. A new study in PLoS Biology by Chunyan Mou, Denis Headon, and their colleagues provides clues to this mystery by investigating a mutation that affects skin patterning. Patterns in vertebrate skin operate on a macro and micro level. In macropatterning, body parts may having strikingly different patterns of hair, scales, or feathers, such as a horse’s mane or a male peacock’s tail feathers. In micropatterning, the periodic spacing between individual hairs or feathers is typically uniform at any given location in the skin. Unlike macropatterns, which are defined by positional information conveyed by the dermis distinct to different anatomical regions, micropatterns are controlled by so-called reaction-diffusion mechanisms in which opposing activating and inhibiting protein signals dictate whether or not a field of cells may give rise to skin appendages like hair or feathers. The stronger the activating signal and the weaker the inhibitory signal, the denser the appendages (and vice versa). Previous research in chickens and mice suggests that various bone morphogenetic proteins (BMPs) act as inhibitors in skin reactiondiffusion systems, while WNT and FGF pathway proteins have activating effects. Proteins in the BMP family are known to be involved in many developmental processes during embryogenesis, including early feather development. Although the end result of reactiondiffusion systems in the skin is a field of cells that can give rise to hair or feathers of a certain density, by comparing the hairless tail of a mouse to its furry body or the bare neck of an ostrich to the feathers on its wings, it’s obvious that micropatterning isn’t uniform across the body. How differences in skin macropatterns translate to the micropattern level, leading to different densities of appendages, or even no appendages at all, remains obscure. To address this question, the authors analyzed a mutation in chickens aptly called Naked neck. In a previous study, the authors mapped the Naked neck mutation to a large region on chicken chromosome 3. This time, they used genetic fine mapping to narrow down the responsible region and found that of five candidate genes in the smaller region, one, BMP12, was normally expressed in embryonic skin and clusters of cells that will give rise to individual feathers (called placodes). Furthermore, BMP12 expression was increased in the skin of Naked neck mutant embryos at the time when feather patterning begins. Further mapping revealed that a large DNA insertion 260,000 base pairs away from the BMP12 gene was always present in chickens with the Naked neck mutation but never in wild-type chickens, indicating that it is associated with the Naked neck trait. How might this mutation modulate feather patterning on neck skin? In chickens, the first feather macropattern occurs seven days after fertilization and consists of 14 stripes of cells that run along the length of the developing embryo. These cell stripes broaden and propagate on both sides of the body. Micropatterning follows close behind in the cell stripes, with the establishment of rows of placodes. After determining that BMP signaling is increased in Naked neck mutant embryos, the authors treated explant cultures of wild-type chicken skin with high levels of BMP12 protein and found that it caused loss of placodes on neck skin but not on body skin, recapitulating the Naked neck phenotype. This suggests that there is something about neck skin that makes it more sensitive to BMP signaling compared to skin on the body. To figure out the molecular basis for neck skin’s higher sensitivity to BMP signaling, the authors compared the gene

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How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow), Research integrity
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Commentary · Consensus signal: Commentary
Teacher disagreement score0.160
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0010.001
Research integrity0.0040.002
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.034
GPT teacher head0.256
Teacher spread0.222 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designNot applicable
Domainnot available
GenreCommentary

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2011
Admission routes1
Has abstractyes

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