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Record W2158980919 · doi:10.1139/x07-114

Genetic structure, diversity, and inbreeding of eastern white pine under different management conditions

2007· article· en· W2158980919 on OpenAlexvenueno aff
Paula E. Marquardt, Craig S. Echt, Bryan K. Epperson, Dan M. Pubanz

Bibliographic record

VenueCanadian Journal of Forest Research · 2007
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenetic diversity and population structure
Canadian institutionsnot available
FundersSouthern Research StationNorth Central Research StationNorthern Research StationMichigan State UniversityUniversity of Michigan
KeywordsInbreedingGenetic diversityBiologyGenetic structureEcologyForestryForest managementGenetic variationGeographyPopulationDemography

Abstract

fetched live from OpenAlex

Resource sustainability requires a thorough understanding of the influence of forest management programs on the conservation of genetic diversity in tree populations. To observe how differences in forest structure affect the genetic structure of eastern white pine ( Pinus strobus L.), we evaluated six eastern white pine sites across the 234 000 acre (1 acre = 0.4046856 ha) Menominee Indian Reservation in northeastern Wisconsin (45°00′N, 88°45′W). The six sites sampled for nuclear and chloroplast DNA microsatellite markers were of contrasting densities and managed by different management systems: shelterwood, pine release, plantation, and old growth. Three of the sites had natural regeneration, which was also sampled. Mean values of spatial genetic autocorrelation were positive in all mature populations and variable; the strongest spatial structuring of genes occurred in the least disturbed old-growth site (I – E(I) = 0.031). Genetic structuring at the historical old-growth site fit the isolation-by-distance model for a neighborhood size of 130 individuals. Significant inbreeding occurred in five populations, but the seedling or sapling populations as a group (f = 0.088) are significantly less inbred than the local mature populations (f = 0.197). The increase in heterozygosity between generations was attributed to harvesting having reduced the spatial genetic structure of the mature trees.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.018
Threshold uncertainty score0.035

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.042
GPT teacher head0.295
Teacher spread0.253 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations45
Published2007
Admission routes1
Has abstractyes

Explore more

Same venueCanadian Journal of Forest ResearchSame topicGenetic diversity and population structureFrench-language works237,207