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Record W2160810913 · doi:10.4319/lo.2006.51.5.2102

Inorganic carbon uptake and intracellular assimilation by subarctic Pacific phytoplankton assemblages

2006· article· en· W2160810913 on OpenAlexafffund
Philippe D. Tortell, Cheryl L. Martin, Miranda E. Corkum

Bibliographic record

VenueLimnology and Oceanography · 2006
Typearticle
Languageen
FieldEarth and Planetary Sciences
TopicMarine and coastal ecosystems
Canadian institutionsUniversity of British Columbia
FundersDivision of Ocean SciencesNatural Sciences and Engineering Research Council of Canada
KeywordsRuBisCOTotal inorganic carbonPhosphoenolpyruvate carboxylasePhytoplanktonCarbonic anhydraseChlorophyll aChemistryPhotosynthesisBotanyBiologyEnvironmental chemistryNutrientCarbon dioxideBiochemistryEcologyEnzyme

Abstract

fetched live from OpenAlex

We report the results of inorganic carbon (C) uptake experiments and activity measurements for carbonic anhydrase, ribulose 1,5-bisphosphate carboxylase/oxygenase (Rubisco), and phosphoenolpyruvate carboxylase (PEPC) in offshore and coastal regions of the eastern subarctic Pacific Ocean. HCO3- was the dominant source of inorganic C taken up by phytoplankton at all sampling locations, accounting for ∼60−90% of total C uptake. The uptake of HCO3- occurred primarily through a direct transport system, while indirect HCO3− use, mediated by extracellular carbonic anhydrase (eCA), played a minor role in the C uptake system. Direct HCO3- transport and eCA activity were not related to ambient nutrient or CO2 concentrations or to phytoplankton biomass (chlorophyll a [Chl a]) or primary productivity. There was significant variability in the biomass-normalized activities of Rubisco, PEPC, and total (intracellular and extracellular) carbonic anhydrase. The activities of all of the enzymes measured exhibited significant correlations with both CO2 concentrations and Chl a. PEPC activity averaged 20% of Rubisco activity (range 0.5-110%), and the PEPC : Rubisco ratio was positively correlated with CO2 concentrations and negatively correlated with Chl a. Carbonic anhydrase activity was strongly anticorrelated with CO2 and positively correlated with Chl a. The results provide evidence for the importance of CO2-regulated carbon concentrating mechanisms in marine waters.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.016
Threshold uncertainty score0.534

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.004
GPT teacher head0.159
Teacher spread0.156 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations51
Published2006
Admission routes2
Has abstractyes

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