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Does the M184V resistance mutation in reverse transcriptase reduce HIV transmission?*

2011· letter· en· W2161961882 on OpenAlexaboutno aff
Dan Turner

Bibliographic record

VenueHIV Medicine · 2011
Typeletter
Languageen
FieldImmunology and Microbiology
TopicHIV Research and Treatment
Canadian institutionsnot available
Fundersnot available
KeywordsResistance mutationReverse transcriptaseVirologyGenotypingMutationPopulationGenotypeMutation rateDrug resistanceViral loadMedicineBiologyHuman immunodeficiency virus (HIV)GeneticsPolymerase chain reactionGene

Abstract

fetched live from OpenAlex

The M184V mutation is one of the most studied mutations conferring resistance to HIV-1. This mutation is known to adversely affect viral replicative capacity as well as the efficiency of reverse transcriptase (RT) initiation and function [1,2]. A study from the McGill AIDS Centre, Montreal showed that the rate of viruses harbouring the M184V mutation was reduced compared with that of wild-type (WT) viruses and that of viruses harbouring other drug resistance mutations (DRMs) [3]. It was also shown that, in the potentially transmitter (PT) population, 70% of resistant viruses harboured the M184V mutation compared with only 10% in the primary HIV-infected population (PHI). Moreover, it was shown that the viral load (VL) of patients harbouring M184V in the PT population was lower than that of patients without the mutation. It has been suggested that both decreased VL and viral fitness in the case of M184V-containing HIV-1 variants may impact on viral transmissibility. Limitations of that study were the use of standard population-based genotyping methods which detect viral populations that are >20%, the known ability of the mutation to be deselected, and the occurrence of WT viral outgrowth in the absence of drug pressure. The study appearing in this issue by Buckton et al. [4] also showed a lower rate of viruses harbouring the M184V mutation (0.6%) compared with K103N (6.1%) when the authors used standard genotyping methods. When they used a technique that detects minor populations, however, the rate was 7.9% for M184V and 7.3% for K103N. Their study showed that the minor population technique significantly increased the rate of detection of the M184V mutation. Other studies have also demonstrated high rates of M184V using minor population techniques in naïve patients. A study from Germany showed a rate of 10.2% for K103N and a rate of 12.2% for M184V [5]. The group from Montreal explored the presence of K103N and M184V minority species among 30 PHIs lacking this mutation using the standard genotyping method. Viral minority species were found in three (10%) patients with K103N and four (11%) patients with M184V [6]. Those studies revealed that these mutations can be detected in similar proportions in naïve patients, despite the impact of M184V on HIV fitness, suggesting that transmission of this mutation takes place at a higher frequency than suggested by the results of conventional sequencing methods. Do the later studies satisfactorily demonstrate that there is no diminution of virus transmission with M184V mutations? How compatible is this conclusion with the facts that patients with lower VL are less likely to transmit HIV and that M184V has been shown to lower VL? We are unaware of any existing animal models that can adequately exemplify the transmission of DRMs. The above-mentioned studies clearly show that the new techniques for detecting resistance are more sensitive for mutations that confer lower fitness, such as M184V. The role of these mutations in the process of transmission is, however, still a matter of debate.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesInsufficient payload (model declined to judge)
Consensus categoriesInsufficient payload (model declined to judge)
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Commentary · Consensus signal: none
Teacher disagreement score0.706
Threshold uncertainty score0.999

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0010.002
Insufficient payload (model declined to judge)0.0060.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.023
GPT teacher head0.264
Teacher spread0.242 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; both teacher heads agree on what is shown here.

Study designNot applicable
Domainnot available
GenreCommentary

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations2
Published2011
Admission routes1
Has abstractyes

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