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Record W2165088139 · doi:10.1093/icesjms/fsu007

The importance of length and age composition data in statistical age-structured models for marine species

2014· article· en· W2165088139 on OpenAlexaff
Kotaro Ono, Roberto Licandeo, Melissa L. Muradian, Curry J. Cunningham, Sean C. Anderson, Felipe Hurtado-Ferro, Kelli F. Johnson, Carey R. McGilliard, Cole C. Monnahan, Cody Szuwalski, Juan L. Valero, Katyana A. Vert-pre, Athol R. Whitten, André E. Punt

Bibliographic record

VenueICES Journal of Marine Science · 2014
Typearticle
Languageen
FieldEnvironmental Science
TopicMarine and fisheries research
Canadian institutionsSimon Fraser UniversityUniversity of British Columbia
Fundersnot available
KeywordsStock assessmentFlatfishFishingSardineStock (firearms)Life historyFisheryStatisticsAge structureGeographyBiologyEnvironmental scienceEcologyDemographyMathematicsFish <Actinopterygii>

Abstract

fetched live from OpenAlex

Abstract Management of marine resources depends on the assessment of stock status in relation to established reference points. However, many factors contribute to uncertainty in stock assessment outcomes, including data type and availability, life history, and exploitation history. A simulation–estimation framework was used to examine the level of bias and accuracy in assessment model estimates related to the quality and quantity of length and age composition data across three life-history types (cod-, flatfish-, and sardine-like species) and three fishing scenarios. All models were implemented in Stock Synthesis, a statistical age-structured stock assessment framework. In general, the value of age composition data in informing estimates of virgin recruitment (R0), relative spawning-stock biomass (SSB100/SSB0), and terminal year fishing mortality rate (F100), decreased as the coefficient of variation of the relationship between length and age became greater. For this reason, length data were more informative than age data for the cod and sardine life histories in this study, whereas both sources of information were important for the flatfish life history. Historical composition data were more important for short-lived, fast-growing species such as sardine. Infrequent survey sampling covering a longer period was more informative than frequent surveys covering a shorter period.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.031
metaresearch head score (Gemma)0.093
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: Simulation or modeling
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.031
Threshold uncertainty score0.162

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0310.093
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0010.001
Science and technology studies0.0000.001
Scholarly communication0.0010.002
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.034
GPT teacher head0.295
Teacher spread0.261 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations79
Published2014
Admission routes1
Has abstractyes

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