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Record W2170580103 · doi:10.1126/scitranslmed.3000278

A Role for <i>VAV1</i> in Experimental Autoimmune Encephalomyelitis and Multiple Sclerosis

2009· article· en· W2170580103 on OpenAlexaff
Maja Jagodic, Céline Colacios, Rita Georges Nohra, Anne S. Dejean, Amennai Daniel Beyeen, Mohsen Khademi, Audrey Casemayou, Lucille Lamouroux, Christine Duthoit, Olivier Papapietro, Louise K. Sjöholm, I Bernard, Dominique Lagrange, Ingrid Dahlman, Frida Lundmark, Annette Oturai, Helle Bach Soendergaard, Anu Kemppinen, Janna Saarela, Pentti J. Tienari, Hanne F. Harbo, Anne Spurkland, Sreeram V. Ramagopalan, A. Dessa Sadovnick, George C. Ebers, Maria Seddighzadeh, Lars Klareskog, Lars Alfredsson, Leonid Padyukov, Jan Hillert, M. Clanet, Gilles Edan, Bertrand Fontaine, Gilbert J. Fournié, Ingrid Kockum, Abdelhadi Saoudi, Tomas Olsson

Bibliographic record

VenueScience Translational Medicine · 2009
Typearticle
Languageen
FieldImmunology and Microbiology
Topicinterferon and immune responses
Canadian institutionsUniversity of British Columbia
Fundersnot available
KeywordsExperimental autoimmune encephalomyelitisMultiple sclerosisProinflammatory cytokineMedicineImmunologyEncephalomyelitisAutoimmune diseaseAutoimmunityNeuroscienceImmune systemBiologyInflammation

Abstract

fetched live from OpenAlex

Multiple sclerosis, the most common cause of progressive neurological disability in young adults, is a chronic inflammatory disease. There is solid evidence for a genetic influence in multiple sclerosis, and deciphering the causative genes could reveal key pathways influencing the disease. A genome region on rat chromosome 9 regulates experimental autoimmune encephalomyelitis, a model for multiple sclerosis. Using interval-specific congenic rat lines and association of single-nucleotide polymorphisms with inflammatory phenotypes, we localized the gene of influence to Vav1, which codes for a signal-transducing protein in leukocytes. Analysis of seven human cohorts (12,735 individuals) demonstrated an association of rs2546133-rs2617822 haplotypes in the first VAV1 intron with multiple sclerosis (CA: odds ratio, 1.18; CG: odds ratio, 0.86; TG: odds ratio, 0.90). The risk CA haplotype also predisposed for higher VAV1 messenger RNA expression. VAV1 expression was increased in individuals with multiple sclerosis and correlated with tumor necrosis factor and interferon-gamma expression in peripheral blood and cerebrospinal fluid cells. We conclude that VAV1 plays a central role in controlling central nervous system immune-mediated disease and proinflammatory cytokine production critical for disease pathogenesis.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.559
Threshold uncertainty score0.342

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.027
GPT teacher head0.281
Teacher spread0.254 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations63
Published2009
Admission routes1
Has abstractyes

Explore more

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