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Record W2171669134 · doi:10.3354/ame01553

Virus-driven nitrogen cycling enhances phytoplankton growth

2012· article· en· W2171669134 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.
fundA Canadian funder is recorded on the work.
aboutThe title or abstract carries a Canadian signal from the geographic lexicon.

Bibliographic record

VenueAquatic Microbial Ecology · 2012
Typearticle
Languageen
FieldEnvironmental Science
TopicBacteriophages and microbial interactions
Canadian institutionsUniversity of British Columbia
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsPhytoplanktonAmmoniumBiologyEcologyNutrientChemistry

Abstract

fetched live from OpenAlex

Viruses have been implicated as major players in aquatic nutrient cycling, yet few data exist to quantify their significance. To determine the effect of viruses on ammonium regeneration by bacteria, experiments were carried out in the oligotrophic Indian Ocean and productive False Creek, Vancouver, Canada. Bacteria were concentrated and then diluted with virus-free water to reduce virus abundance, or with virus-replete water to restore natural virus abundances. Virus-replete treatments showed increased ammonium concentrations compared to treatments with viruses removed (differences of 0.287 0.14 and 1.44 0.73 mol l -1 , mean SD, in the Indian Ocean and False Creek, respectively). Bacterial abundances were lower, while phytoplankton abundances and chlorophyll a (chl a) concentrations were greater in the virus-replete treatments, consistent with the increased availability of ammonium in the presence of viruses. These data demonstrate that viral lysis leads to ammonium production, likely through the liberation of dissolved organic N that is remineralised by uninfected bacteria. In turn, the released ammonium fuels primary production. These results show that viruses play a critical role in the marine N cycle, and suggest that viral lysis likely supplies a significant portion of the global N requirements of phytoplankton.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesInsufficient payload (model declined to judge)
Consensus categoriesInsufficient payload (model declined to judge)
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.169
Threshold uncertainty score0.992

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0120.009

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.009
GPT teacher head0.234
Teacher spread0.225 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it