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Record W2171895847 · doi:10.1139/h11-004

Contractile activity-induced gene expression in fast- and slow-twitch muscle

2011· article· en· W2171895847 on OpenAlexafffundvenue
Linda M.‐D. Nguyen, David A. Hood

Bibliographic record

VenueApplied Physiology Nutrition and Metabolism · 2011
Typearticle
Languageen
FieldMedicine
TopicAdipose Tissue and Metabolism
Canadian institutionsYork University
FundersCanada Research ChairsYork University
KeywordsStimulationInternal medicineGene expressionEndocrinologyBiologyTranscription factorSoleus muscleMessenger RNAPhosphorylationSkeletal muscleGeneCell biologyBiochemistryMedicine

Abstract

fetched live from OpenAlex

Many proteins that function as transcription factors regulate the transcriptional activity of nuclear genes encoding mitochondrial proteins. Several of these are rapidly inducible with contractile activity, followed by a recovery phase. The aim of the present study was to evaluate the expression of a number of rapidly responding gene products to an acute bout of contractile activity followed by a recovery period in both slow- and fast-twitch muscle. Using an in vitro isolated muscle preparation, extensor digitorum longus (EDL) and soleus muscles were stimulated for 15 min, followed by 30 min recovery. Following stimulation, ATP levels were decreased in both the EDL and soleus (25% and 32%, respectively). We found that phosphorylation of p38 MAP kinase was elevated in both muscle types, with a more dramatic 3.5-fold increase observed in the EDL muscle. Peroxisome proliferator-activated receptor γ coactivator-1α (PGC-1α) mRNA expression was unchanged as a result of stimulation and recovery, while c-Fos transcript levels were decreased as a result of stimulation, but returned to resting values following recovery. Interestingly, nuclear respiratory factor 1 mRNA levels were unaffected by stimulation, but increased significantly (34%) during the recovery phase. These data suggest that the extent of the induction of transcription factor mRNA to acute exercise, which leads to subsequent muscle adaptations, is transcript specific and dependent on (i) the activation of upstream kinases, (ii) the muscle phenotype, and (iii) the duration of the recovery period.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.005

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.027
GPT teacher head0.261
Teacher spread0.235 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2011
Admission routes3
Has abstractyes

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