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Record W2171975428 · doi:10.1098/rsif.2010.0352

Lipopolymer gradient diffusion in supported bilayer membranes

2010· article· en· W2171975428 on OpenAlexaff
Huaiying Zhang, Reghan J. Hill

Bibliographic record

VenueJournal of The Royal Society Interface · 2010
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicLipid Membrane Structure and Behavior
Canadian institutionsMcGill University
Fundersnot available
KeywordsDiffusionBilayerChemistryMembraneViscosityLipid bilayerHydrodynamic radiusRelaxation (psychology)Analytical Chemistry (journal)Synthetic membraneThermodynamicsPolymerChromatographyPhysicsOrganic chemistry

Abstract

fetched live from OpenAlex

We measure the gradient diffusion coefficient of a model lipopolymer in supported lipid bilayer membranes from Fourier-transform post-electrophoresis relaxation. The experiments and accompanying quantitative interpretation furnish the concentration dependence of the gradient diffusion coefficient. In striking contrast to the recent measurements of the self-diffusion coefficient from fluorescence recovery after photobleaching, the lipopolymer gradient diffusion coefficient increases with concentration. We interpret the enhancement at small but finite concentrations using the Scalettar-Abney-Owicki (SAO) statistical mechanical theory (1988) and the Bussell-Koch-Hammer (BKH) hydrodynamic theory (1995), which are customarily adopted to model membrane protein dynamics. The SAO theory furnishes an effective disc radius and soft repulsive interaction radius that are comparable to the Flory radius of the unperturbed polyethylene glycol chains. On the other hand, the BKH theory predicts a gradient diffusion coefficient that decreases with disc/membrane protein concentration. Thus, in contrast to membrane proteins, we conclude that lipopolymer hydrodynamic interactions are weak because the principal disturbances are in the low-viscosity aqueous phase. Accordingly, lipopolymer interactions are dominated by thermodynamic interactions among polymer chains. Interestingly, our experiments suggest that increasing (decreasing) the polymer molecular weight should increase (decrease) the relaxation rate of lipopolymer concentration fluctuations.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.017
Threshold uncertainty score0.293

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.006
GPT teacher head0.244
Teacher spread0.238 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations8
Published2010
Admission routes1
Has abstractyes

Explore more

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