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Record W2175804398 · doi:10.1111/een.12280

Precision and accuracy in quantifying herbivory

2015· article· en· W2175804398 on OpenAlexafffund
Marc T. J. Johnson, JEFFERY A. BERTRAND, Martin M. Turcotte

Bibliographic record

VenueEcological Entomology · 2015
Typearticle
Languageen
FieldEnvironmental Science
TopicEcology and Vegetation Dynamics Studies
Canadian institutionsSGS (Canada)University of Toronto
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsHerbivoreBiologyAccuracy and precisionStatisticsEcologyBiological systemComputer scienceMathematics

Abstract

fetched live from OpenAlex

1. Tissue removal by herbivores (i.e. herbivory) is a dominant interaction in most communities which has important impacts on natural and managed ecosystems. Despite the importance of herbivory, we lack a quantitative comparison of the efficacy of the most commonly used methods used to quantify herbivore damage. 2. We examined the factors that affect the precision and accuracy of visual and digital methods commonly used to quantify damage to leaves. 3. We created 224 digital leaves from four plant species. In a fully factorial design we manipulated leaf morphology and species, the location of damage (marginal or internal), estimation method (exact percentage or 25% bins), observer experience and expectancy bias (i.e., bias due to an expected result). Using 583 adult observers, we estimated the precision and accuracy of individuals' ability to visually estimate known levels of damage. In a third smaller experiment, we performed similar analyses using a digital scanner. 4. Across the first two experiments, individuals estimated damage with high precision ( R 2 = 0.75 and 0.80) and accuracy (slope actual vs estimated = 0.88 and 0.86). However, the precision and accuracy of estimates were influenced by plant species, the location of damage, and estimation method. Inexperienced individuals also overestimated low levels of damage, and this bias decreased with experience. Digital methods were precise ( R 2 = 0.98) whereas accuracy was statistically indistinguishable from visual methods (slope = 0.91). 5. Visual estimates of damage provide the fastest and most cost‐effective method for quantifying herbivory, and our results show they can be precise and accurate. We use our results to provide specific recommendations for future research.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.045
metaresearch head score (Gemma)0.119
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.045
Threshold uncertainty score0.237

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0450.119
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0020.002
Science and technology studies0.0010.002
Scholarly communication0.0030.002
Open science0.0010.002
Research integrity0.0020.001
Insufficient payload (model declined to judge)0.0010.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.057
GPT teacher head0.317
Teacher spread0.260 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations120
Published2015
Admission routes2
Has abstractyes

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