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Phylogeny of Nearctic Species of the Xylosteana Group of <I>Archips</I> Hübner (Lepidoptera: Tortricidae) Based on Combined Analysis of Morphological and Mitochondrial DNA Data Sets

2002· article· en· W2178779287 on OpenAlexafffund
James J. Kruse, Felix A. H. Sperling

Bibliographic record

VenueAnnals of the Entomological Society of America · 2002
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicLepidoptera: Biology and Taxonomy
Canadian institutionsUniversity of Alberta
FundersNatural Sciences and Engineering Research Council of CanadaNational Museum of Natural HistoryUniversity of MinnesotaWashington State Department of AgricultureWashington State UniversityNational Science Foundation
KeywordsBiologyNearctic ecozoneParaphylyTortricidaeZoologyLepidoptera genitaliaHolarcticCladeGenusTaxonomy (biology)Phylogenetic treeSpecies groupsBotanyGeneticsGene

Abstract

fetched live from OpenAlex

The Holarctic Archips xylosteana Group consists of at least 18 morphologically similar species in the Nearctic, three of which were synonymized with A. argyrospila by Razowski and subsequently returned to species status, two that were described since 1986 but are clearly related to A. argyrospila, and an additional Western clade of A. argyrospila haplotypes that Razowski had not seen. We examined the morphology of all described Nearctic Xylosteana Group members plus one undescribed species, as well as DNA variation in a 816 bp segment of the mitochondrial COI gene for 17 of these species. We also examined three of five species of Archips from the Packardiana Group (=Archippus Freeman), and three outgroup genera (Argyrotaenia Stephens, Clepsis Guenée, and Choristoneura Lederer). Parsimony analyses of the combined molecular and morphological data sets gave better resolution and a better supported tree than did analyses of any single data set. All analyses revealed five species groups, rendering paraphyletic the Xylosteana Group as previously defined. An updated systematic list of Nearctic Archips is provided. We discuss the possibility that our data could support the resurrection of the genus Archippus from synonymy and the recognition of the Cerasivorana Group and the Purpurana Group as new genera. We have elected to leave the genus intact pending future investigations that include the additional Palaearctic members of the group.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesScience and technology studies
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.416
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0000.001
Science and technology studies0.0000.003
Scholarly communication0.0000.000
Open science0.0010.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.050
GPT teacher head0.267
Teacher spread0.217 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations21
Published2002
Admission routes2
Has abstractyes

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Same venueAnnals of the Entomological Society of AmericaSame topicLepidoptera: Biology and TaxonomyFrench-language works237,207