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Record W2181786889

Abstract A81: Relationships between expression of TGF-β factors and breast tumor characteristics in a population-based study from Poland

2009· article· en· W2181786889 on OpenAlexaff
Jonine D. Figueroa, Kathleen C. Flanders, Montserrat García‐Closas, Xiaohong R. Yang, Máire A. Duggan, Ruth M. Pfeiffer, Akira Oshima, Robert Cornelison, Gretchen L. Gierach, Louise A. Brinton, Jolanta Lissowska, Beata Pepłońska, Lalage M. Wakefield, Mark E. Sherman

Bibliographic record

VenueCancer Epidemiology and Prevention Biomarkers · 2009
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicTGF-β signaling in diseases
Canadian institutionsUniversity of Calgary
Fundersnot available
KeywordsTransforming growth factorBreast cancerExtracellularPopulationImmunohistochemistryCarcinogenesisMedicinePathologyEndoglinR-SMADTransforming growth factor betaCancerCancer researchBiologyInternal medicineTGF alphaReceptorGrowth factorCell biology
DOInot available

Abstract

fetched live from OpenAlex

Transforming growth factor-beta (TGF-β signaling has been implicated in breast development and carcinogenesis. However, the associations between expression of individual members of the TGF-β superfamily and breast cancer characteristics remains undefined. To address this gap, we evaluated the relationship of expression of TGF-β signaling factors to clinically important tumor characteristics among 842 invasive breast carcinomas identified in a population-based case-control study conducted in Poland. We evaluated immunohistochemical stains performed on tissue microarrays for six components of the TGF-β signaling pathway, including four TGF-β ligands [intracellular TGF-β1, extracellular TGF-β1, TGF-β2, and TGF-β3], the TGF-β type II receptor (TGF-βR2), and the downstream transcriptional modulator, phosphorylated-SMAD2 (p-SMAD2). Three pathologists independently read two of the six stains and scored the staining as negative, equivocal, weakly positive, or strongly positive, depending on the stain. Re-examination of 40 randomly selected spots demonstrated satisfactory intra-observer agreement for all stains (weighted kappa ≥75%). Most tumors were positive for extracellular TGF-β1 (77%), TGF-β2 (89%), TGF-β3 (92%), and TGF-βR2 (71%), whereas expression of intracellular TGF-β1 was detected in 32% and p-SMAD2 in 59% of cases. Lobular histology was associated with expression of extracellular TGF-β1 (χ2 p=

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.011
Threshold uncertainty score0.530

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.046
GPT teacher head0.337
Teacher spread0.291 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2009
Admission routes1
Has abstractyes

Explore more

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