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Record W2190168538 · doi:10.1139/cjfas-2015-0233

The effects of high rearing density on the potential for domestication selection in hatchery culture of steelhead (<i>Oncorhynchus mykiss</i>)

2015· article· en· W2190168538 on OpenAlexvenueno aff
Neil F. Thompson, Michael S. Blouin

Bibliographic record

VenueCanadian Journal of Fisheries and Aquatic Sciences · 2015
Typearticle
Languageen
FieldEnvironmental Science
TopicFish Ecology and Management Studies
Canadian institutionsnot available
FundersBonneville Power AdministrationOregon Chapter of the American Fisheries SocietyOregon State University
KeywordsHatcheryDomesticationBiologySelection (genetic algorithm)Rainbow troutCaptivityJuvenileSelective breedingAdaptation (eye)ReplicateDensity dependenceAnimal scienceOncorhynchusFisheryZoologyEcologyFish <Actinopterygii>DemographyPopulationStatisticsMathematics

Abstract

fetched live from OpenAlex

Hatchery-reared steelhead (Oncorhynchus mykiss) often have lower fitness than natural-origin fish when spawning in the wild. Fitness loss in hatcheries is partly due to genetic adaptation to captivity (domestication), but the underlying selection pressures driving adaptation remain unknown. Circumstantial evidence suggests that adaptation to hatcheries is accelerated when fish are reared at high density. We hypothesized two mechanisms by which high rearing densities could accelerate adaptation to the hatchery. First, high density could increase the among-family component of variation in fork length, which could increase the opportunity for selection after release. Second, a growth trade-off in fork length among families could occur across densities (family-by-environment interaction). We raised the same set of families, in replicate, at each of two densities. We found main effects of density (high density reduced body size) and family (accounted for 33%–53% of variance in size at release) on juvenile fork length. However, high density did not increase the percentage of variance in fork length among families, and there was weak evidence for a family-by-environment interaction. We propose an alternate model of how increased density might exacerbate domestication selection. The relationship between size at release and probability of survival is strongly nonlinear (almost truncational) for steelhead. Because high density decreases the fork lengths of all families approximately equally, high density could simply reduce the number of families that are above a threshold for high survival, resulting in strong among-family selection after release from the hatchery.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.007
Threshold uncertainty score0.014

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0000.001
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.011
GPT teacher head0.208
Teacher spread0.197 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations21
Published2015
Admission routes1
Has abstractyes

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