MétaCan
Menu
Back to cohort
Record W2191021609 · doi:10.1016/j.media.2015.08.006

Probabilistic non-linear registration with spatially adaptive regularisation

2015· article· en· W2191021609 on OpenAlexfundno aff
Ivor Simpson, M. Jorge Cardoso, Marc Modat, David M. Cash, Mark W. Woolrich, Jesper Andersson, Julia A. Schnabel, Sébastien Ourselin

Bibliographic record

VenueMedical Image Analysis · 2015
Typearticle
Languageen
FieldComputer Science
TopicMedical Image Segmentation Techniques
Canadian institutionsnot available
FundersEngineering and Physical Sciences Research CouncilNational Institute of Biomedical Imaging and BioengineeringCanadian Institutes of Health ResearchUniversity of California, San DiegoGenentechNational Institutes of HealthIXICOServierEisaiNational Institute on AgingNational Institute for Health and Care ResearchSeventh Framework ProgrammeNorthern California Institute for Research and EducationPfizerBiogenBioClinicaUniversity College London Hospitals NHS Foundation TrustAlzheimer's Disease Neuroimaging InitiativeEli Lilly and CompanyU.S. Department of DefenseMedical Research CouncilMeso Scale DiagnosticsSynarcUniversity of Southern CaliforniaUniversity College LondonMedpaceNovartis Pharmaceuticals CorporationBristol-Myers SquibbF. Hoffmann-La RocheAlzheimer's Drug Discovery FoundationFoundation for the National Institutes of Health
KeywordsComputer scienceTransformation (genetics)Constraint (computer-aided design)Probabilistic logicBayesian probabilityInferenceArtificial intelligenceBayesian inferenceImage registrationPattern recognition (psychology)MathematicsImage (mathematics)

Abstract

fetched live from OpenAlex

This paper introduces a novel method for inferring spatially varying regularisation in non-linear registration. This is achieved through full Bayesian inference on a probabilistic registration model, where the prior on the transformation parameters is parameterised as a weighted mixture of spatially localised components. Such an approach has the advantage of allowing the registration to be more flexibly driven by the data than a traditional globally defined regularisation penalty, such as bending energy. The proposed method adaptively determines the influence of the prior in a local region. The strength of the prior may be reduced in areas where the data better support deformations, or can enforce a stronger constraint in less informative areas. Consequently, the use of such a spatially adaptive prior may reduce unwanted impacts of regularisation on the inferred transformation. This is especially important for applications where the deformation field itself is of interest, such as tensor based morphometry. The proposed approach is demonstrated using synthetic images, and with application to tensor based morphometry analysis of subjects with Alzheimer's disease and healthy controls. The results indicate that using the proposed spatially adaptive prior leads to sparser deformations, which provide better localisation of regional volume change. Additionally, the proposed regularisation model leads to more data driven and localised maps of registration uncertainty. This paper also demonstrates for the first time the use of Bayesian model comparison for selecting different types of regularisation.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: none
GenreCandidate signal: Methods · Consensus signal: Methods
Teacher disagreement score0.983
Threshold uncertainty score0.523

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0020.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.002
Science and technology studies0.0000.000
Scholarly communication0.0000.001
Open science0.0010.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.024
GPT teacher head0.293
Teacher spread0.269 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations44
Published2015
Admission routes1
Has abstractyes

Explore more

Same venueMedical Image AnalysisSame topicMedical Image Segmentation TechniquesFrench-language works237,207