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Record W2193841621 · doi:10.1139/cjb-2012-0278

Genetic differentiation in an artificial population of the threatened plant<i>Lupinus oreganus</i>(Fabaceae)

2013· article· en· W2193841621 on OpenAlexvenueno aff
Paul M. Severns

Bibliographic record

VenueBotany · 2013
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicBotanical Research and Chemistry
Canadian institutionsnot available
FundersU.S. Army Corps of EngineersBotanical Society of America
KeywordsBiologyGenetic diversityThreatened speciesPopulationEvolutionary biologyGenotypingGenetic variationEcologyGeneticsGenotypeDemography

Abstract

fetched live from OpenAlex

Reintroduction, supplemental planting for genetic rescue, and the creation of artificial seed production populations are common methods to conserve rare plant species, but empirical studies assessing the effects of artificial selection on genetic diversity are rare. I conducted a retrospective DNA genotyping study on an artificial population (hereinafter Office) of the threatened plant, Lupinus oreganus Heller, to determine whether the process of establishing the Office population facilitated genetic differentiation and if genetic diversity was maintained in the Office cohort. Genotyping indicated that uncommon maternal lineages (cpDNA haplotypes) were selected for in the artificial population and that the Office population was genetically distinct from both seed source patches. Furthermore, despite a small population size of seven individuals, cpDNA haplotype and nDNA simple sequence repeat allelic diversity was maintained in the surviving Office cohort. This study suggests that small artificial rare plant populations may be beneficial for capitalizing on the existing within-population genetic diversity, but they may also select for uncommon allelic diversity and facilitate genetic differentiation.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.803
Threshold uncertainty score0.367

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.022
GPT teacher head0.224
Teacher spread0.202 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations2
Published2013
Admission routes1
Has abstractyes

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