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Isolation of functional murine naive and memory T cell subsets in as little as 15 minutes (P3387)

2013· article· en· W2208828329 on OpenAlexaff
Andy I. Kokaji, Vesna Posarac, Luciana Tonelli, Jeong Hun Sun, Armon Molavi, Maureen Fairhurst, Karina L. McQueen, Terry E. Thomas

Bibliographic record

VenueThe Journal of Immunology · 2013
Typearticle
Languageen
FieldImmunology and Microbiology
TopicImmune Cell Function and Interaction
Canadian institutionsStemcell Technologies
Fundersnot available
KeywordsEffectorCell biologyBiologyT cellCell sortingIL-2 receptorCD8Cytotoxic T cellAcquired immune systemCytolysisInterleukin 21Flow cytometryImmunologyAntigenImmune systemMolecular biologyIn vitroBiochemistry

Abstract

fetched live from OpenAlex

Abstract Effective cellular immunity requires naïve CD4+ and CD8+ T cells to undergo activation, proliferation and differentiation into various effector cell populations following antigen exposure. CD4+ and CD8+ T cell activation induces the production of cytokines and cytolytic effector proteins which function to coordinate immune responses or directly eliminate infected cells. While most effector T cells become senescent and apoptotic, some effector T cells further differentiate into memory T cells which can provide long lasting immunity. Although the signals that regulate these processes have been widely investigated, continued efforts will eventually construct a definitive model for the role of T cells in adaptive immunity. In many cases, highly purified cells are required for these studies and current methods for their isolation from mice require either lengthy protocols or flow based cell sorting. We have recently developed three new column-free, immunomagnetic cell isolation kits to isolate untouched naïve and memory CD4+ T cells, and naïve CD8+ T cells in as little as 15 minutes. Purities of up to 98% can be achieved as assessed by CD44 and CD62L expression using the manual EasySep™ pour-off method or the fully automated RoboSep™ cell separator. The purified naïve and memory T cells can be immediately used for downstream assays and are fully functional as assessed by in vitro proliferation and cytokine production assays.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Methods · Consensus signal: none
Teacher disagreement score0.003
Threshold uncertainty score0.008

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0030.002

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.008
GPT teacher head0.206
Teacher spread0.198 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2013
Admission routes1
Has abstractyes

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