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Rapid, column-free two-step procedure for the enrichment of human Th17 Cells from peripheral blood (56.13)

2012· article· en· W2253920929 on OpenAlexaff
Maureen Fairhurst, Jessie Z. Yu, Terry E. Thomas

Bibliographic record

VenueThe Journal of Immunology · 2012
Typearticle
Languageen
FieldImmunology and Microbiology
TopicImmunodeficiency and Autoimmune Disorders
Canadian institutionsStemcell Technologies
Fundersnot available
KeywordsC-C chemokine receptor type 6CXCR3Immunomagnetic separationCell biologyT cellBiologyRAR-related orphan receptor gammaCD28IntracellularMolecular biologyCytotoxic T cellChemistryImmune systemIn vitroImmunologyBiochemistryChemokine receptorChemokine

Abstract

fetched live from OpenAlex

Abstract Human Th17 cells play a critical role in the regulation of autoimmune disease and antimicrobial host defenses through production of pro-inflammatory cytokines IL17A and IL-17F. They can be characterized by expression of surface receptors including IL-23R, CCR6, CD161 and lineage-specific transcription factor RORC, but lack of CXCR3 expression. The major disadvantages of current isolation methods are the requirement for in vitro stimulation and the co-secretion of IFN-γ. We have developed a 2-step EasySepTM immunomagnetic column-free method for the enrichment of CD4+CXCR3-CCR6+ cells from fresh peripheral blood nucleated cells (PBNC). First, non-CD4 T cells and CXCR3+ cells are targeted for depletion using dextran-coated magnetic particles and a cocktail of antibody complexes. Labeled cells are separated using an EasySepTM magnet, and pre-enriched CD4 T-cells are poured off. Next, CCR6+ cells are positively selected from the pre-enriched fraction. The procedure can be automated using RoboSepTM. Starting with a frequency of 5 ± 2% CD4+CXCR3-CCR6+ cells, purities of 94 ± 3% (n=10) can be obtained. The resulting cells produce high levels of IL-17 with minimal IFN-γ when measured by ELISA and intracellular staining and increased RORC mRNA expression over total CD4 T cells and CD4+CXCR3+ T cells (Th1 cells). Enrichment of unstimulated human Th17 cells enables the investigation of adaptive immune responses and regulation mechanisms required for the development of future therapies.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.011
Threshold uncertainty score0.035

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0010.001
Science and technology studies0.0010.000
Scholarly communication0.0010.000
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0110.016

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.011
GPT teacher head0.235
Teacher spread0.224 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations0
Published2012
Admission routes1
Has abstractyes

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