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Record W2259945957 · doi:10.5282/edoc.15870

FADS gene variants, diet and atopic phenotypes and lipids in children

2013· article· en· W2259945957 on OpenAlexfundno aff
Marie Standl

Bibliographic record

VenueElectronic Theses of LMU Munich (Ludwig-Maximilians-Universität München) · 2013
Typearticle
Languageen
FieldNursing
TopicFatty Acid Research and Health
Canadian institutionsnot available
FundersNational Institute of Environmental Health SciencesNorwegian Institute of Public HealthMünchner Zentrum für GesundheitswissenschaftenHelmholtz Zentrum MünchenStatens Serum InstitutCanadian Institutes of Health ResearchMedical Research CouncilAbbott DiagnosticsNational Institutes of HealthLungenliga SchweizSociedad Española de Neumología y Cirugía TorácicaNational Health and Medical Research CouncilOulun YliopistoAsthma and Lung UKChristian-Albrechts-Universität zu KielUniversité de GenèveVrije Universiteit AmsterdamErasmus Universiteit RotterdamKarolinska InstitutetZonMwBristol-Myers Squibb FoundationTechnische Universität MünchenGentofte HospitalDeutsche ForschungsgemeinschaftNederlandse Organisatie voor Wetenschappelijk OnderzoekUniversity of MelbourneMedizinischen Hochschule HannoverImperial College LondonUniversity of TorontoSchweizerischer Nationalfonds zur Förderung der Wissenschaftlichen ForschungEuropean CommissionMinistère de la SantéUniversity of ManchesterBundesministerium für Bildung, Wissenschaft, Forschung und TechnologieChildren's Hospital of PhiladelphiaTerveyden ja hyvinvoinnin laitosKing's College LondonSahlgrenska AkademinEuropean Respiratory SocietyUniversity of BristolWorld Health OrganizationEesti TeadusfondiWellcome TrustFreiwillige Akademische GesellschaftItä-Suomen YliopistoUniversität BaselAarhus UniversitetNational Research CentreUniversity of PennsylvaniaWomen and Infants Research FoundationBundesministerium für Bildung und ForschungChildren's Medical ResearchRijksuniversiteit GroningenBristol-Myers SquibbLudwig-Maximilians-Universität MünchenMinistry of EnvironmentBiocenter, University of OuluMünchner Zentrum für Gesundheitswissenschaften, Ludwig-Maximilians-Universität MünchenNational Institute for Health and Care ResearchRheinische Friedrich-Wilhelms-Universität BonnUniversitair Medisch Centrum GroningenBundesamt für GesundheitSahlgrenska UniversitetssjukhusetNorges ForskningsrådErasmus Medisch CentrumBritish Lung FoundationNational Science Foundation
KeywordsPhenotypeGeneGeneticsBiologyMedicine

Abstract

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Zusammenfassung VII Genen liegt, die die Immunantwort regulieren.Diese Ergebnisse stützen die Hypothese, dass atopische Dermatitis durch Defekte in der natürlichen Hautbarriere und der Immunregulation verursacht wird.Allerdings sind weitere Untersuchungen erforderlich um die ursächlichen Varianten an diesen Loci zu identizieren und den Mechanismus zu verstehen, durch den atopische Dermatitis hervorgerufen wird.VII Regionale und sozio-ökonomische Unterschiede in der Ernährung von Kindern im Schulalter wurden in der vierten Publikation untersucht.Ein höherer Grad elterlicher Bildung war mit einem höheren Konsum gesunder Nahrungsmittel, wie Brot, Butter, Eier, Nudeln, Gemüse/Salat und Obst und einer niedrigeren Aufnahme von Margarine, Fleischprodukten, Pizza, Nachspeise und Limonaden assoziiert.Auÿerdem wurden grundsätzliche Unterschiede in der Ernährung zwischen Ost-und Westdeutschland beobachtet.In der fünften Publikation wird der Zusammenhang zwischen Lipiden und Varianten des FADS Genclusters untersucht.Kinder, die homozygot das seltene Allel tragen, hatten im Vergleich zu Kindern, die das häuge Allel homozygot tragen, niedriger Cholesterinwerte und LDL-Konzentration.Träger des homozygoten Allels zeigten, im Vergleich zu Kindern, die das häuge Allel homozygot tragen, niedrigere HDL-Werte und höhere Triglyzeridwerte.Zusätzlich wurde der Einuss der n-3 Fettsäurenaufnahme geprüft.Eine höhere n-3 Fettsäurenaufnahme war assoziiert mit einer höheren Cholesterin-, LDL-und HDL-Konzentration und niedrigeren Triglyzeridwerten.Es wurde allerdings keine Interaktion mit dem FADS Genotyp beobachtet.Diese Ergebnisse lassen auf einen Zusammenhang zwischen FADS Gencluster, Fettsäurenaufnahme und allergischen Erkrankungen oder Lipiden bei Kindern schlieÿen.Dadurch wird die Hypothese gestützt, dass ein kausaler Zusammenhang zwischen Fettsäurenaufnahme aus der Nahrung und atopischen Erkrankungen bei Kindern besteht.Dies könnte helfen, den komplexen Zusammenhang zwischen allergischer Inammation und Fettsäuren zu verstehen.VIII 2 Specic Aims and Results 2 Specic Aims and Results Specic AimsThe aim of this thesis was to investigate the association between dietary intake, FADS variants and atopic phenotypes or lipids in children.The main objectives were• to assess the inuence of FADS1 FADS2 gene cluster polymorphisms on the association between dietary fatty acid intake and atopic diseases and allergic sensitization.• to evaluate the impact of FADS1 FADS2 gene cluster polymorphisms on the association between breastfeeding and asthma.• to identify new risk loci for atopic dermatitis in a meta-analysis of genome-wide association studies.• to describe regional dierences between eastern and western Germany with regard to food, nutrient and supplement intake in children, and analyze the association with parental education and equivalent income.• to investigate whether lipid levels are inuenced by the FADS genotype already in children and whether this association interacts with dietary intake of n-3 fatty acids.This thesis is based on ve manuscripts, which are published in Clinical & Experimental Allergy, Allergy the European Journal of Allergy and Clinical Immunology, Nature Genetics, Public Health Nutrition and PLoS ONE.For all publications, I am the rst, or shared rst author.I was signicantly involved in developing the research question, study design, performed the statistical analyses and interpreted the results.All comments and suggestions from the co-authors were included in the nalized version.2 Specic Aims and Results 1997 and 1999 in Munich, Leipzig, Wesel and Bad Honnef.The participants were not pre-selected based on family history of allergic diseases 45 .Detailed descriptions of the LISAplus and GINIplus studies have been published elsewhere ( 44 and 45 , respectively). The Food Frequency QuestionnaireA food frequency questionnaire (FFQ) was developed to measure children's usual food and nutrient intake over the past 12 months, and more specically to estimate energy, fatty acid and antioxidant intake at 10 years of age.The FFQ comprised a list of 82 food items accompanied by several questions about the preferred fat and energy content of products, preparation methods, diets and food preferences, buying habits and dietary supplement use.The consumption frequencies and portion size estimates were converted to average consumption in grams per day and linked to the German Nutrient Data Base (BLS) version II.3.1 46 .The design of the FFQ, including the selection of the food item list, validation, and the calculation of food and nutrient intake is described further by Stiegler et al.47 .Information obtained by FFQ was used for the rst, second, fourth and fth manuscript. Tested Variants of the FADS Gene ClusterSix SNPs of the FADS1 FADS2 gene cluster (rs174545, rs174546, rs174556, rs174561, rs174575 and rs3834458) were typed.Five of these variants (rs174545, rs174546, rs174556, rs174561 and rs3834458) were selected based on the previous publications in adult populations 29,48 .Moreover, the SNP rs174575 was included in order to obtain a better coverage of the FADS gene cluster.This SNP was selected based on a previous publication in children 49 . MethodsUp to now, the association between dietary fatty acid intake and the development of atopic diseases has been inconsistent

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.011
Threshold uncertainty score0.037

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0110.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.008
GPT teacher head0.226
Teacher spread0.218 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Published2013
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