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Immunohistochemical Localization and Multi‐gene Expression Profiling of O2 Sensor Components in Airway Chemoreceptors

2008· article· en· W2267977234 on OpenAlexafffund
Jie Pan, Herman Yeger, Ernest Cutz

Bibliographic record

VenueThe FASEB Journal · 2008
Typearticle
Languageen
FieldNeuroscience
TopicNeuroscience of respiration and sleep
Canadian institutionsSickKids FoundationHospital for Sick ChildrenUniversity of Toronto
FundersCanadian Institutes of Health Research
KeywordsNADPH oxidaseBiologyP22phoxCell biologyMolecular biologyReactive oxygen species

Abstract

fetched live from OpenAlex

Pulmonary neuroepithelial bodies (NEB) are airway chemoreceptors that express a membrane bound O2 sensor molecular complex (NADPH oxidase coupled to an O2 sensitive K+ channel). We used confocal immunofluorescence microscopy with specific antibodies against NADPH components and O2 sensitive K+ channels (K+O2) to label NEB in rat /rabbit lung and NEB related H146 tumor cell line. For gene expression profiling of NEB cells microdissected from human lung, and H146 cells, we used a custom MultiGene‐12TM RT‐PCR array that included NADPH oxidase complex and homologues /accessory proteins (NOX1‐4, phox‐p22, p40, p47, p67, Rac1, NOXO1 and NOXA1) and K+O2 channels (TASK1‐3, Kv ‐1.2,1.5, 2.1, 3.1, 3.3, 3.4, 4.2, 4.3). In rat lung, NOX2, NOX4, p22phox, TASK1 and Kv3.3 (and Kv3.4 in rabbit) localized mainly to the apical plasma membrane of NEB cells, and membrane or sub‐membrane regions in H146 cells. NOX2 co‐localized with p22phox, p40phox, p47phox and Kv3.3, while NOX4 co‐localized with TASK1. Gene expression profiling of NEB/H146 cells confirmed the presence of all NOX proteins except NOX3 and NOXO1, as well as all common K+O2 channels, except Kv1.5 and Kv4.3. Adjacent airway epithelial cells expressed only TASK2, Kv2.1, Kv3.4 and Kv4.2. Present findings support the plasma membrane model of O2 sensing by airway chemoreceptors that appears to be cell and organ specific. (Supported by grants from CIHR)

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.005

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.056
GPT teacher head0.274
Teacher spread0.218 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2008
Admission routes2
Has abstractyes

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