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The Unfolded Protein Response in Skeletal Muscle Adaptations to Exercise

2015· article· en· W2271827036 on OpenAlexaff
Jonathan M. Memme, David A. Hood

Bibliographic record

VenueThe FASEB Journal · 2015
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicMitochondrial Function and Pathology
Canadian institutionsYork University
Fundersnot available
KeywordsUnfolded protein responseXBP1Skeletal muscleEndoplasmic reticulumMitochondrial biogenesisBiologyMessenger RNAMitochondrionCell biologyInternal medicineEndocrinologyGeneRNA splicingMedicineGeneticsRNA

Abstract

fetched live from OpenAlex

The unfolded protein responses of both the mitochondria (UPR mt ) and the endoplasmic reticulum (UPR ER ) are important in maintaining cellular homeostasis during stimulus‐induced increases in protein synthesis. Exercise is a well‐established trigger for the synthesis of mitochondrial proteins via organelle biogenesis, regulated by the transcriptional coactivator PGC‐1a. However, little work has focused on the role that the UPR mt and the UPR ER play in exercise‐induced adaptations. To investigate this, we subjected rats to 3 hrs of contractile activity (CCA) for 1, 2, 3, 5 or 7 days, followed by 3 hrs recovery, and examined the gene expression responses involved in early‐onset adaptations to exercise. PGC‐1a mRNA expression increased 12‐fold as early as 1 day of CCA, while the ER chaperone BIP increased in mRNA by 2‐4‐fold between 1‐7 days. Likewise, CHOP expression was elevated 2‐3‐fold throughout 1‐7 days of CCA, while XBP1 mRNA displayed a 47% elevation after 2 days of CCA, but decreased by 26% at 7 days. Expression of upstream UPR mt sensors (LonP, ERa and SirT3) remained unchanged over 7 days of CCA, but the mRNAs encoding the mitochondrial chaperones CPN10, mtHSP70 and HSP60 were elevated by 40‐100% between 2‐7 days of CCA. These changes preceded increases in mitochondrial content and marker proteins such as NQO1. Thus, these findings indicate a potential role of the UPR mt and the UPR ER in early exercise‐induced mitochondrial adaptations in skeletal muscle. Supported by NSERC.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.003

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.024
GPT teacher head0.265
Teacher spread0.240 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2015
Admission routes1
Has abstractyes

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