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Modulation of eIF2alpha Phosphorylation and PKR Activation by Nck

2008· article· en· W2283165475 on OpenAlexafffundabout
Éric Cardin, Louise Larose

Bibliographic record

VenueThe FASEB Journal · 2008
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicRNA regulation and disease
Canadian institutionsMcGill University
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsProtein kinase RPhosphorylationeIF2Cell biologyKinaseEIF-2 kinaseIntegrated stress responseSignal transductionSignal transducing adaptor proteinProtein kinase ABiologyTranslation (biology)Mitogen-activated protein kinase kinaseBiochemistryCyclin-dependent kinase 2Messenger RNAGene

Abstract

fetched live from OpenAlex

Phosphorylation of the α‐subunit of the eukaryotic initiation factor 2 (eIF2) on Ser 51 is an early event associated with downregulation of protein synthesis at the level of translation and constitutes a potent mechanism to overcome various stress conditions. In mammals, four eIF2α‐kinases PERK, PKR, HRI and GCN2, activated following specific stresses, have been involved in this process. In a first study, we demonstrated that the adaptor protein Nck, classically implicated in receptor tyrosine kinases signal transduction, modulates eIF2α‐kinases‐mediated eIF2αSer 51 phosphorylation in a specific manner. In fact, we showed that Nck reduces eIF2α phosphorylation in conditions activating PKR or HRI as we reported for PERK, but fails to do so in conditions activating GCN2. Herein, we report that Nck reduces PKR activation in response to dsRNA. In addition, we found that Nck reduces dsRNA‐induced activation of p38MAPK, a PKR‐downstream substrate, and cell death. Finally, we show that Nck interacts with inactive PKR. All together, these results suggest that Nck could regulate threshold levels of PKR activation. Our study reveals the existence of a novel mechanism regulating phosphorylation of eIF2α on Ser 51 under various stress conditions and identifies Nck as a regulator of the tumor suppressor and antiviral protein kinase PKR. Supported by the Natural Sciences and Engineering Research Council of Canada (NSERC).

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.004

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.010
GPT teacher head0.227
Teacher spread0.216 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2008
Admission routes3
Has abstractyes

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