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Record W2284457579

The Effect of Trap Plants on the Population Diversity of Bradyrhizobium japonicum

2004· article· en· W2284457579 on OpenAlexaffabout
Amir Lakzian, Eden S. P. Bromfield

Bibliographic record

VenueIranian Journal of Biotechnology · 2004
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicLegume Nitrogen Fixing Symbiosis
Canadian institutionsCegep de Sainte Foy
Fundersnot available
KeywordsBradyrhizobium japonicumBradyrhizobiumCultivarBiologyInoculationPopulationHorticultureDendrogramBotanyVeterinary medicineGenetic diversityBacteriaSymbiosisRhizobiaceaeRhizobium
DOInot available

Abstract

fetched live from OpenAlex

One hundred and four isolates of Bradyrhizobium japonicum were isolated from nodules of two different trap plants, Viz. Soya bean cultivars, Maple Glen and Orford which were inoculated with two different soilsamples (Ottawa and St-Hugus soils). All isolates were clustered based on PCR/RFLP of 16S-23S rRNAgenes. RFLP analysis was performed to characterize all the isolates using six different endonucleaseenzymes. The data was analyzed by using Jamp software. Using dendrogram data, all the isolates weregrouped into six different clusters. There were four and five clusters of Bradyrhizobium japonicum in Ottawaand St-Hugus soils, respectively. Three clusters were common between two cultivars of Soya bean wheninoculated with Ottawa soil and four common clusters were recognized when trap plants inoculated with St-Hugus soil. In Ottawa soil, cluster I was not detected by Orford cultivar, likewise in St-Hugus soil, cluster VIwas not detected by Maple Glen cultivar of Soya bean. Isolates of cluster III were dominantly trapped whenMaple Glen and Orford cultivars inoculated with Ottawa soil but isolates from clusters I, IV and III weretrapped when they were inoculated with St-Hugus soil. Since different cultivars trapped different isolate typesit can be concluded that for population studies of rhizobial bacteria different trap plants can provide a bettercomposition of native population of bacteria.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.004
Threshold uncertainty score0.007

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.010
GPT teacher head0.199
Teacher spread0.189 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations2
Published2004
Admission routes2
Has abstractyes

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