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FACS Analysis and Immunohistochemical Analysis of Human Myogenic Stem Cell Number and Cell‐cycle Kinetics in Response to Acute Myotrauma

2010· article· en· W2286929672 on OpenAlexaff
Bryon R. McKay, Kyle Toth, Mark A. Tarnopolsky, Gianni Parise

Bibliographic record

VenueThe FASEB Journal · 2010
Typearticle
Languageen
FieldMedicine
TopicMesenchymal stem cell research
Canadian institutionsMcMaster University Medical CentreMcMaster University
Fundersnot available
KeywordsImmunohistochemistryCell sortingBiologyCellCell cycleCell biologyFlow cytometryMolecular biologyChemistryImmunologyBiochemistry

Abstract

fetched live from OpenAlex

In humans, myogenic stem cell (SC) enumeration is an important measurement used to determine the SC response in vivo to various physiological stimuli. The current standard for enumeration is immunohistochemistry (IHC) with antibodies against common SC markers (i.e. Pax7, NCAM). Fluorescent activated cell sorting (FACS) analysis may provide a more accurate determination of changes in the SC pool and provide additional analysis unachievable with IHC. FACS analysis revealed Pax7+ cells/mg isolated from 50mg fresh tissue increased 36% 24h after injury. The number of Pax7+ cells/mg in G2/M phase of the cell cycle increased 202% after 24h and cells/mg in G1/G0 and S‐phase increased 32% and 59% respectively. IHC data illustrated, in relation to N‐CAM or C‐Met alone, Pax7 alone was expressed on a greater number of cells. Furthermore, all 3 markers appear to sufficiently and similarly report SC expansion after injury (26–36%). Here we illustrate the use of FACS as a precise method of enumerating SC number on a per milligram tissue basis, providing a more easily understandable relation to muscle mass as opposed to number of myonuclei or fiber number. Although IHC is a powerful tool for SC analysis, FACS is an objective, reliable and effective method for SC quantification and can provide additional information such as cell‐cycle kinetics more accurately than IHC alone.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.004
Threshold uncertainty score0.014

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0040.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.017
GPT teacher head0.318
Teacher spread0.301 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2010
Admission routes1
Has abstractyes

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