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Record W2290268596 · doi:10.1016/j.molcel.2016.02.005

System-Wide Modulation of HECT E3 Ligases with Selective Ubiquitin Variant Probes

2016· article· en· W2290268596 on OpenAlexafffund
Wei Zhang, Kuen‐Phon Wu, Maria A. Sartori, Hari Kamadurai, Alban Ordureau, Chong Jiang, Peter Y. Mercredi, Ryan Murchie, Jicheng Hu, Avinash K. Persaud, Manjeet Mukherjee, Nan Li, Anne Doye, John R. Walker, Yi Sheng, Zhenyue Hao, Yanjun Li, Kevin R. Brown, Emmanuel Lemichez, Junjie Chen, Yufeng Tong, J. Wade Harper, Jason Moffat, Daniela Rotin, Brenda A. Schulman, Sachdev S. Sidhu

Bibliographic record

VenueMolecular Cell · 2016
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicUbiquitin and proteasome pathways
Canadian institutionsCanada Research ChairsStructural Genomics ConsortiumUniversity of New BrunswickUniversity Health NetworkUniversity of TorontoSickKids FoundationHospital for Sick ChildrenYork University
FundersEshelman Institute for Innovation, University of North Carolina at Chapel HillNational Institute of Neurological Disorders and StrokeNational Institute of General Medical SciencesNational Institutes of HealthNovartis PharmaCanada Foundation for InnovationOntario Ministry of Economic Development and InnovationWellcome TrustAmerican Lebanese Syrian Associated CharitiesFundação de Amparo à Pesquisa do Estado de São PauloGenome CanadaNational Cancer InstituteAbbVieCanadian Institutes of Health ResearchInnovative Medicines InitiativeWellcomePfizerBoehringer IngelheimU.S. Department of EnergyHoward Hughes Medical Institute
KeywordsUbiquitinBiologyNEDD4SubfamilyUbiquitin ligaseComputational biologyCell biologyUbiquitin-Protein LigasesGeneticsGene

Abstract

fetched live from OpenAlex
No abstract in any covered source. Its absence is recorded, not treated as a negative.

No abstract. This is not a gap in this database; OpenAlex has none either. 23.3% of the frame is in this state, and the screen finds HALF as much metaresearch here, so the absence is a measured bias rather than a missing field.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.056
Threshold uncertainty score0.531

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.005
GPT teacher head0.194
Teacher spread0.189 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations173
Published2016
Admission routes2
Has abstractno

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