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Record W2293388829

Crochemore's Repetitions Algorithm Revisited - Computing Runs.

2009· article· en· W2293388829 on OpenAlexaff
František Franěk, Mei Jiang

Bibliographic record

VenuePrague Stringology Conference · 2009
Typearticle
Languageen
FieldComputer Science
TopicAlgorithms and Data Compression
Canadian institutionsMcMaster University
Fundersnot available
KeywordsAlgorithmComputer scienceSuffix arrayTime complexitySuffixExtension (predicate logic)Compressed suffix arrayFactorizationParallel algorithmSuffix treeData structure
DOInot available

Abstract

fetched live from OpenAlex

Crochemore's repetitions algorithm introduced in 1981 was the first O(n log n) algorithm for computing repetitions. Since then, several linear-time worst-case algorithms for computing runs have been introduced. They all follow a similar strategy: first compute the suffix tree or array, then use the suffix tree or array to compute the Lempel-Ziv factorization, then using the Lempel-Ziv factorization compute all the runs. It is conceivable that in practice an extension of Crochemore's repetitions algorithm may outperform the linear-time algorithms, or at least for certain classes of strings. The nature of Crochemore's algorithm lends itself naturally to parallelization, while the linear-time algorithms are not easily conducive to parallelization. For all these reasons it is interesting to explore ways to extend the original Crochemore's repetitions algorithm to compute runs. We present three variants of extending the repetitions algorithm to compute runs: two with a worsen complexity of O(n (log n)2), and one with the same complexity as the original algorithm. The three variants are tested for speed of performance and their memory requirements are analyzed. The third variant is tested and analyzed for various memory-saving alterations. The purpose of this research is to identify the best extension of Crochemore's algorithm for further study, comparison with other algorithms, and parallel implementation.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.012
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Theoretical or conceptual · Consensus signal: none
GenreCandidate signal: Methods · Consensus signal: Methods
Teacher disagreement score0.007
Threshold uncertainty score0.022

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0020.012
Meta-epidemiology (narrow)0.0020.001
Meta-epidemiology (broad)0.0010.002
Bibliometrics0.0020.003
Science and technology studies0.0010.002
Scholarly communication0.0030.008
Open science0.0030.002
Research integrity0.0020.003
Insufficient payload (model declined to judge)0.0070.004

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.017
GPT teacher head0.268
Teacher spread0.251 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designTheoretical or conceptual
Domainnot available
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2009
Admission routes1
Has abstractyes

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