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Record W2295316816 · doi:10.1093/ofid/ofv133.884

First Mycobacterium abscessus Outbreak Associated With Recreational Water in the United States

2015· article· en· W2295316816 on OpenAlexaboutno aff
Ingrid Lundgren, Christine Hahn, Kris Carter, Sarah Correll, Amanda Bruesch, T H Rand

Bibliographic record

VenueOpen Forum Infectious Diseases · 2015
Typearticle
Languageen
FieldMedicine
TopicMycobacterium research and diagnosis
Canadian institutionsnot available
Fundersnot available
KeywordsMycobacterium abscessusOutbreakMedicinePathogenic organismVirologyCoronavirus disease 2019 (COVID-19)Environmental healthMicrobiologyMycobacteriumInternal medicineInfectious disease (medical specialty)DiseaseTuberculosisPathologyBiology

Abstract

fetched live from OpenAlex

Background. Mycobacterium abscessus, a rapidly growing acid-fast bacterium naturally found in water, soil, and dust, is an opportunistic pathogen that causes rare infections of the skin and subcutaneous tissues. Outbreaks of skin infections related to recreational water exposure were identified in Canada in 2003, and in Italy 2009–2011, but no previous outbreaks associated with recreational water in the United States had been reported. In Idaho, February–May 2013, M. abscessus skin infections were diagnosed in 11 children. Methods. Clinical evaluation of children, mycobacterial culture and identification, and epidemiologic and environmental investigations were performed. Results. Affected children were aged 2–6 years; 9 (82%) were female. All were otherwise healthy with no diagnosed immunocompromising conditions. Most children presented with erythematous nodular lesions on their hands or feet. In some cases, initial symptoms were attributed to viral hand, foot, and mouth disease. Illness onsets occurred January–May 2013. One case was confirmed as M. abscessus group not chelonae by bacterial RNA polymerase β subunit (rpoB) gene sequencing, 2 were confirmed as M. abscessus/chelonae complex by 16S rDNA sequence analysis, and in 2 cases, acid-fast bacilli were detected in fixed skin biopsy or smear of exudate; 6 additional clinically-compatible cases shared epidemiologic risk factors. Epidemiologic investigation determined that the sole common exposure among cases was playing in a fitness facility's wading pool December 2012–April 2013. Environmental investigation found a worn rubber mat on the bottom of the pool at the slide exit and worn polyurethane decking suspected to have allowed colonization by M. abscessus. Swabs of the fountain strainer and slide ladder cultured positive for M. abscessus/chelonae with pulsed-field gel electrophoresis patterns related, but not identical to those of clinical isolates. Mycobacterium spp. were isolated from the pool water. The pool operator hyperchlorinated, drained, scrubbed, and disinfected the pool. The worn rubber mat was replaced. No associated cases were reported after environmental remediation. Conclusion. An outbreak of M. abscessus skin infections among children was associated with a wading pool and controlled by environmental remediation. This was the first such reported outbreak in the United States. Disclosures. All authors: No reported disclosures.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.044
Threshold uncertainty score0.088

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0020.000
Scholarly communication0.0010.000
Open science0.0000.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.028
GPT teacher head0.296
Teacher spread0.267 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2015
Admission routes1
Has abstractyes

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