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Record W2295527282 · doi:10.1111/1365-2664.12647

Restructuring tree provenance test data to conform to reciprocal transplant experiments for detecting local adaptation

2016· article· en· W2295527282 on OpenAlexafffundabout
Pengxin Lu, William C. Parker, S. J. Colombo, Rongzhou Man

Bibliographic record

VenueJournal of Applied Ecology · 2016
Typearticle
Languageen
FieldEnvironmental Science
TopicForest ecology and management
Canadian institutionsOntario Forest Research InstituteMinistry of Natural Resources and Forestry
FundersCanadian Forest ServiceMinistry of Natural Resources
KeywordsLocal adaptationAdaptation (eye)BiologyEcologyPopulationGeographyDemography

Abstract

fetched live from OpenAlex

Summary Local adaptation is a fundamental assumption in delineating seed zones and developing seed transfer guidelines to safeguard climatic adaptation of tree and plant species during forest regeneration and ecological restoration. It is also broadly assumed for forest tree species that show genetic differentiation among geographic populations, especially for those with widespread natural distributions that occur in distinct environments. However, due to a scarcity of suitable data, the inference of local adaptation has rarely been validated for forest tree species through reciprocal transplant experiments ( RTE s). In this study, we illustrate a novel approach to restructure tree provenance test data to conform to RTE s and use recently proposed statistical models to detect local adaptation, using white spruce Picea glauca (Moench) Voss as an example. Our research demonstrates how similar studies can be conducted to validate local adaptation in other forest species and populations, for which RTE s are lacking, but where large, high‐quality provenance test data sets are available. Contrary to common belief, our results show that local adaptation is absent in survival and height for white spruce populations from Ontario, Canada, although they have evolved in considerably different climatic habitats, and exhibit substantial and clinal genetic differentiation and significant genotype‐by‐environment interactions in these two adaptive traits. Synthesis and applications . Our results show that the common assumption of local adaptation in forest tree species may not necessarily be correct within significant portions of their natural range. In forest genetic studies, population differentiation in adaptive traits has often been attributed to local adaptation without rigorous validation. Our results caution against such interpretation of experimental results. In the absence of local adaptation as shown by reciprocal transplant experiments, assisted migration may be considered as an option for enhancing forest adaptation to climate change.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Other design · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.702
Threshold uncertainty score0.296

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.028
GPT teacher head0.258
Teacher spread0.230 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designOther design
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations21
Published2016
Admission routes3
Has abstractyes

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