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Record W2298075793

AN OVERVIEW OF DRUG BINDING TO HUMAN SERUM ALBUMIN: PROTEIN FOLDING AND UNFOLDING

2007· article· en· W2298075793 on OpenAlexaff
H A Tajmir Riahi

Bibliographic record

VenueScientia Iranica · 2007
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicProtein Interaction Studies and Fluorescence Analysis
Canadian institutionsUniversité du Québec à Trois-Rivières
Fundersnot available
KeywordsHuman serum albuminChemistryCircular dichroismBinding constantChromatographyNuclear chemistryBiochemistryBinding site
DOInot available

Abstract

fetched live from OpenAlex

Human Serum Albumin (HSA) is a principal extracellular protein with a high concentration in blood plasma and a carrier of many drugs to different molecular targets. Drug binding to HSA can alter the protein biophysical and biochemical properties of protein. The structural analysis of human serum albumin complexes, with naturally occurring flavonoids quercetin(antioxidant), kaempferol (antioxidant), delphinidin (antioxidant), AZT (3'-azido-3'-deoxythymidine) (anti-AIDS), aspirin (anti inflammatory), taxol (anticancer), cisplatin (anticancer), atrazine (herbicide), 2,4-D (herbicide), polyamines (biogenic), chlorophyll (antimutagenic), chlorophyllin (antitumor), poly(ethylene glycol) (polymer), vandyl cation and vanadate anion in aqueous solution are reported. Using capillary electrophoresis, FTIR (Fourier transform infrared), UV-Visible and CD (Circular dichroism) spectroscopic methods, the drug binding mode, the binding constant and the effects of drug complexation on protein secondary structure are determined. The concentrations of HSA used were 0.6 to 0.3 mM, while different drug concentrations were 1~$mu$M to 1 mM. Structural analysis showed drugs are mostly located along the polypeptide chains, with both specific and non-specific interactions. The stability of drug-HSA complexes were in the order: K_VO^2+=1.2times 10^8M^-1 > K_AZT=1.9 times 10^6M^-1>K_del=4.7times 10^5M^-1>K_PEG=4.1times 10^5M^-1>K_kae=2.6times 10^5M^-1>K_que=1.4times 10^5M^-1>K_atrazine=3.5times 10^4M^-1>K_chlorophyll=2.9times 10^4M^-1>K_2,4-D=2.5times 10^4M^-1>K_spermine=1.7times 10^4M^-1>K_taxol=1.43times 10^4M^-1>K_aspirin=1.04times 10^4M^-1>K_chlorophyllin=7.0times 10^3M^-1>K_VO3^-=6.0times 10^3M^-1>K_spermidine=5.4times 10^3M^{-1}>K_putrescine=3.9times 10^3M^1>K_cisplatin=1.2times 10^2M^-1. At low drug concentration (1 muM), protein conformation was not altered (infrared and CD results), while, at high drug content(1 mM), a major reduction of alpha-helix from 60-55% (free HSA) to 49-40% and an increase of beta-structure from 22-15% (free HSA) to 33-23% in the drug-protein complexes occurred. These observations indicated that low drug content induced protein stabilization (folding), whereas, at high drug concentration, a partial protein destabilization (unfolding)occurred in these drug-HSA complexes.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.002
Threshold uncertainty score0.006

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0020.002
Science and technology studies0.0000.000
Scholarly communication0.0010.001
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0020.002

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.030
GPT teacher head0.346
Teacher spread0.316 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations57
Published2007
Admission routes1
Has abstractyes

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