MétaCan
Menu
Back to cohort
Record W2300335133 · doi:10.5376/gab.2015.06.0010

Investigation of PVL and MecA Gene Locies in Methicillin-Resistant<i> Staphylococcus aureus</i> (MRSA) Strains Isolated from Nosocomial Samples of Hospital Patients and Hospital Staff

2015· article· en· W2300335133 on OpenAlexvenueno aff
Nesrin Turaçlar

Bibliographic record

VenueGenomics and Applied Biology · 2015
Typearticle
Languageen
FieldMedicine
TopicAntimicrobial Resistance in Staphylococcus
Canadian institutionsnot available
Fundersnot available
KeywordsStaphylococcus aureusMethicillin-resistant Staphylococcus aureusMedicineMicrobiologySCCmecBiologyBacteriaGenetics

Abstract

fetched live from OpenAlex

Objective : Methicillin-resistant (MRSA) is a bacterium responsible for some infections difficult to treat in humans. Antibiotic resistance is the ability of microorganisms to resist the effects of antibiotic. MRSA is a strain of Staphylococcus aureus that is resistant to a large group of antibiotics by its definition. We studied in the Archeometry and Biotechnology Laboratory of Science Faculty in Selcuk University. In this study, the samples were taken from cultured nosocomial infections of 233 hospital staff and 477 hospital patients (total 710) in the Medical School Hospital of Selcuk University. We collected 2 Methicillin-susceptible Staphylococcus aureus (MSSA) samples from hospital patients and 40 Methicillin-resistant Staphylococcus aureus (MRSA) samples from hospital patients and staff (36 hospital patients 7.5%, 4 hospital staff 1.7%) for this research. Methods : We looked into present of mecA-1 , mecA-2 , PVL-1 , PVL-2 , and PVL-3 genes in each samples by PCR methods. mecA-1 and mecA-2 gene loci or band patterns in 40 MRSA samples was amplified by PCR. Results : mecA-1 and mecA-2 were observed in 40 MRSA, but not observed in 2 MSSA. PVL-1 gene was observed in 22 MRSA, PVL-2 gene was observed in 25 MRSA, PVL-3 gene was observed in 33 MRSA. PVL gene region was not observed in 2 MSSA strains. Molecular findings were verified the microbiologic results in the research. The mutation was not determined in MRSA originated from hospital patients and staff. Conclusion : The result of this study showed that the prevalence of MRSA was high in the hospital. It is an important sign to meet the challenges of the fight against epidemics.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.004

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.019
GPT teacher head0.234
Teacher spread0.215 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2015
Admission routes1
Has abstractyes

Explore more

Same venueGenomics and Applied BiologySame topicAntimicrobial Resistance in StaphylococcusFrench-language works237,207