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The regulation of mitochondrial movement within muscle cells

2013· article· en· W2306528414 on OpenAlexafffund
Sobia Iqbal, David A. Hood

Bibliographic record

VenueThe FASEB Journal · 2013
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicMitochondrial Function and Pathology
Canadian institutionsYork University
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsOrganelleCell biologyMitochondrionCytoplasmIonomycinMyocyteBAPTACalciumEndoplasmic reticulumBiologyChemistryThapsigarginActinBiophysicsIntracellular

Abstract

fetched live from OpenAlex

Mitochondria are dynamic organelles and their movement and morphology are controlled by their interaction with the cytoskeleton. Our purpose was to investigate regulatory events governing mitochondrial movement within muscle cells. Thus, we transfected C2C12 myoblasts with DsRED2‐Mito DNA to visualize mitochondria using realtime imaging. Destabilization of microtubules (MT) using nocodazole reduced organelle velocity and total path length traveled by 72–75%. The amount of time that mitochondria remained stationary increased ~2‐fold when MTs were destabilized. Downregulation of the MT motor protein, Kif5B by siRNA reduced organelle velocity by 33%. Mitochondrial movement was not affected by actin disruption. Thus, the distribution of mitochondria within muscle cells is dependent on a MT‐based transportation system. Using ionomycin to induce an increase in cytoplasmic calcium, we found that organelle velocity was suppressed by 48%, a situation which was reversible upon the chelation of calcium with EGTA. Mitochondrial velocity was also reduced by 22% when cytoplasmic calcium was elevated using thapsigargin, and it returned to basal levels upon the addition of BAPTA‐AM. By understanding mitochondrial movements we can elucidate the underlying basis for organelle interactions, leading to the formation of the mitochondrial reticulum and the distribution of energy in muscle cells. Supported by NSERC.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.005

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.009
GPT teacher head0.217
Teacher spread0.207 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2013
Admission routes2
Has abstractyes

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