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Fibre Type Specific Distribution of SERCA1a, SERCA2a and Phospholamban in Human Vastus Lateralis

2011· article· en· W2313266148 on OpenAlexaffabout
Éric Bombardier, Darin Bloemberg, Chris Vigna, Joe Quadrilatero, Russ Tupling

Bibliographic record

VenueMedicine & Science in Sports & Exercise · 2011
Typearticle
Languageen
FieldMedicine
TopicPeripheral Nerve Disorders
Canadian institutionsUniversity of Waterloo
Fundersnot available
KeywordsSERCAPhospholambanSkeletal muscleMyosinGene isoformMYH7BiologyPopulationFibre typeInternal medicineEndocrinologyCell biologyChemistryEndoplasmic reticulumATPaseGeneBiochemistryMedicineMyosin light-chain kinase

Abstract

fetched live from OpenAlex

Previous studies in rodents have shown that the expression patterns of sarco(endo)plasmic reticulum Ca2+ ATPase (SERCA) isoforms and myosin heavy chain (MHC) isoforms in skeletal muscle are closely matched. Specifically, fast-twitch skeletal muscles contain SERCA1a and MHCIIb/IIx/IIa whereas slow-twitch muscles contain SERCA2a and MHCI. Phospholamban (PLN), a known regulator of the SERCA pumps, has been shown to be coexpressed almost exclusively with SERCA2a in rodent skeletal muscle. PURPOSE: To examine the fibre type specific expression of SERCA1a, SERCA2a and PLN in human skeletal muscle. METHODS: Muscle biopsies from the vastus lateralis were extracted from five healthy university males and serial cross sections were immunohistochemically stained for SERCA1a (A52), SERCA2a (2A7-A1) and PLN (2D12). Immunofluorescence analysis of MHC expression was also performed with primary antibodies against MHCI (BA-F8), MHCIIa (SC-71) and MHCIIx (6H1). RESULTS: Although the general fibre type distribution of SERCA and MHC isoforms, which is well-defined for rodent skeletal muscle, also clearly exists in human vastus lateralis, we found that SERCA1a was expressed in 58.2±7.5% of muscle fibres containing MHCI and SERCA2a was expressed in 17.7±9.5% of muscle fibres containing MHCIIa. Fibres containing MHCIIx expressed the SERCA1a isoform exclusively. PLN expression was found in all fibres containing MHCI and SERCA2a and in a large population of fibres containing MHCIIa and SERCA1a suggesting that PLN may interact with both SERCA2a and SERCA1a. CONCLUSION: These data suggest differences in the regulation of genes encoding muscle contractile and sarcoplasmic reticulum proteins between rodents and humans and underscore the importance of applying caution when translating findings from animal models to humans. Supported by NSERC Canada Discovery grant.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.015
Threshold uncertainty score0.747

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.002
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.026
GPT teacher head0.279
Teacher spread0.253 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2011
Admission routes2
Has abstractyes

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