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Record W2313575021 · doi:10.1158/1940-6207.prev-09-a19

Abstract A19: S100A7, a prognosticator and early predictive marker for head and neck/oral squamous cell carcinoma

2010· article· en· W2313575021 on OpenAlexaff
S. C. Tripathi, Ajay Matta, Jasbir Kaur, Shyam S. Chauhan, Nootan Kumar Shukla, Ritu Duggal, Siddhartha Dutta Gupta, Ranju Ralhan, K. W. Michael Siu

Bibliographic record

VenueCancer Prevention Research · 2010
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicS100 Proteins and Annexins
Canadian institutionsMount Sinai HospitalIONICS Mass Spectrometry (Canada)
Fundersnot available
KeywordsImmunohistochemistryBiomarkerMedicineHead and neck squamous-cell carcinomaReceiver operating characteristicPathologyCarcinomaInternal medicineOncologyCancerHead and neck cancerBiology

Abstract

fetched live from OpenAlex

Abstract Recently using multidimensional LC-MS/MS with iTRAQ-tagging, we identified a panel of potential Head and Neck/Oral Squamous cell carcinoma (HNOSCC) biomarkers. S100A7 was one of the promising candidate biomarkers in this panel. S100A7 is 11.4 kDa calcium-binding protein of S100 protein family, found to be highly expressed in pre-invasive ductal carcinoma in situ of the breast. Here, we firstly report its potential as a prognostic biomarker for HNOSCC. The present study also further explores the clinical significance of S100A7 in identification of oral leukoplakic lesions in early stages. Ninety-nine HNOSCCs, 100 leukoplakias and 50 non-malignant archived tissues were retrieved from the research tissue bank to determine the expression of psoriasin using immunohistochemistry. The immunohistochemical data were subjected to statistical analyses using the SPSS 13.0 software (Chicago). Sensitivity and specificity were calculated and quantified using receiver operating characteristic (ROC) analysis. The expression of S100A7 in oral lesions was further validated by immunoblotting and RT-PCR analyses in the same tissue samples as used for immunohistochemical analysis. S100A7 expression was found to be significantly increased from normal mucosa to leukoplakia with or without dysplasia to HNOSCC (ptrend<0.001). Receiver Operating Characteristic (ROC) analysis was used to determine the potential of S100A7 as a biomarker for diagnosis of leukoplakia and OSCC. The area-under-the-curve (AUC) value was 0.732 and 0.843 for leukoplakia and OSCC respectively. S100A7 overexpression was significantly associated with dedifferentiation of tumors also. Cytoplasmic S100A7 was significantly associated with tumor size (p=0.015) and stage (p=0.023) of HNOSCC patients. In univariate analysis, nuclear localization of S100A7 was found to be associated poor survival (p < 0.014), while multivariate analysis revealed nuclear S100A7 as independent indicator of disease free survival (hazard ratio, 2.7; 95% confidence interval, 1.4–5.3; p < 0.004). This is the first large-scale study that suggests overexpression of S100A7 to be an early event and a poor prognostic factor in HNOSCC progression. On the basis of our current findings, S100A7 may serve as a potential biomarker in diagnosis and prognosis of HNOSCCs. Citation Information: Cancer Prev Res 2010;3(1 Suppl):A19.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.633
Threshold uncertainty score0.427

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.033
GPT teacher head0.363
Teacher spread0.330 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations0
Published2010
Admission routes1
Has abstractyes

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