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Record W2322041734 · doi:10.1139/cjc-2012-0527

Quantification of contributions of different molecular fragments for antioxidant activity of coumarin derivatives based on QSAR analyses

2013· article· en· W2322041734 on OpenAlexvenueno aff
Indrani Mitra, Achintya Saha, Kunal Roy

Bibliographic record

VenueCanadian Journal of Chemistry · 2013
Typearticle
Languageen
FieldChemistry
TopicFree Radicals and Antioxidants
Canadian institutionsnot available
FundersIndian Council of Medical Research
KeywordsQuantitative structure–activity relationshipChemistryPharmacophoreSubstituentMoietyMoleculeCoumarinStereochemistryCombinatorial chemistryComputational chemistryOrganic chemistry

Abstract

fetched live from OpenAlex

Attempts have been made in the present work using in silico techniques for identification of essential structural features imparting antioxidant potential to naturally available coumarin molecules and their synthetic derivatives. Four different types of modeling tools have been employed for the qualitative and quantitative assessment of the molecular fragments constituting the biological pharmacophore. The descriptor-based quantitative structure–activity relationship (QSAR) and group-based QSAR (G-QSAR) models provide a quantitative estimation of the substituent requirements and the chemical nature of the parent moiety. Subsequently, 3D pharmacophore and hologram QSAR (HQSAR) models enable identification of the key molecular components necessary for the antioxidant potency to the molecules. All of the different models infer the importance of the hydrogen bond acceptor ketonic fragment for interaction of the antioxidant molecules with the neighbouring toxic radicals. Additionally, the phenyl substituent attached to the side chain and the benzene nucleus of the benzopyran moiety also constitute the response pharmacophore for the molecules under study. The models thus developed may serve as an essential query tool for screening of databases for selection of molecules bearing the essential fragments and subsequent prediction of their free radical scavenging potency.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.010
Threshold uncertainty score0.526

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.023
GPT teacher head0.282
Teacher spread0.258 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations14
Published2013
Admission routes1
Has abstractyes

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