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Record W2324023746 · doi:10.1096/fasebj.20.5.a1044

The neutral amino acid transporter B0 gene is up‐regulated in the jejunal villus cells compared to crypt cells measured by quantitative real‐time RT‐PCR in formula‐fed neonatal pigs

2006· article· en· W2324023746 on OpenAlexaff
Chengbo Yang, Zirong Wang, Yulong Yin, Xiaojian Yang, J.R. Pluske, Ming Fan

Bibliographic record

VenueThe FASEB Journal · 2006
Typearticle
Languageen
FieldMedicine
TopicDrug Transport and Resistance Mechanisms
Canadian institutionsUniversity of Guelph
Fundersnot available
KeywordsCryptJejunumMolecular biologyMessenger RNABiologySmall intestineAmino acid transporterTrypan blueAmino acidGene expressionGeneAndrologyCellTransporterBiochemistryEndocrinologyMedicine

Abstract

fetched live from OpenAlex

The Na+‐neutral amino acid (AA) transporter B0 functions for the uptake of luminal neutral AA across the gut apical membrane. The aim of this study was to quantify B0 mRNA expression along the jejunal crypt‐villus axis in fed neonatal pigs. Six Yorkshire gilts were removed from sows at d 5 of age and fed a milk protein‐based liquid formula to 14‐16 d of age before tissue collection. Three epithelial cell fractions, representing cells from the upper villus, the middle villus and the crypt regions, were sequentially isolated, with cell viability of 92‐95% assessed by trypan blue exclusion, along the crypt‐villus axis from the entire jejunum by the distended sac method. The 443‐bp porcine partial mRNA sequence of the neutral AA transporter B0 gene was obtained according to the conserved region in the human gene sequence. The partial porcine mRNA sequence had 86 and 85% homology with the known human and mouse sequences, respectively. Real time RT‐PCR analyses (SmartCycler) using SYBR Green‐I detection kit revealed no differences (P>0.05) in the B0 mRNA abundance between the upper and the middle villus cell fractions but a lower B0 mRNA level (P<0.05) in the crypt cells by using β‐actin as the house‐keeping control. These results suggest that the B0 gene expression is low in crypt cells and is increased with cell differentiation in the villus cells in the formula‐fed neonate.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.004

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.014
GPT teacher head0.237
Teacher spread0.223 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2006
Admission routes1
Has abstractyes

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