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Record W2328469681 · doi:10.2307/3868606

High Bacterial Biodiversity Found in Arctic Tundra

2005· review· en· W2328469681 on OpenAlexaboutno aff
Jane Bradbury

Bibliographic record

VenueFrontiers in Ecology and the Environment · 2005
Typereview
Languageen
FieldEarth and Planetary Sciences
TopicClimate change and permafrost
Canadian institutionsnot available
Fundersnot available
KeywordsTundraBiodiversityArcticThe arcticGeographyEcologyEnvironmental scienceBiologyOceanographyGeology

Abstract

fetched live from OpenAlex

Jane Bradbury When it comes to soil bacteria, there may be more biodiversity in the arctic tundra than previously suspected. Microbial ecologists Josh Neufeld and William Mohn (University of British Columbia, Vancouver, Canada) have examined bacterial DNA sequences in multiple soil samples from three arctic tundra sites and three boreal forest sites. Two of the tundra sites contained a more diverse range of bacteria than the boreal forest samples, explains Neufeld, an unexpected result given the decrease in macroorganism biodiversity with increasing latitude. These days, microbial ecologists are relying on sequence-based molecular techniques to gauge taxonomic diversity. A gene target often used in such studies, is the highly variable ribosomal RNA (rRNA). Neufeld has developed a method for sequencing part of this molecule from many

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Review · Consensus signal: Review
Teacher disagreement score0.007
Threshold uncertainty score0.013

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0020.002
Science and technology studies0.0000.000
Scholarly communication0.0010.001
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.024
GPT teacher head0.212
Teacher spread0.188 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreReview

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2005
Admission routes1
Has abstractyes

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Same venueFrontiers in Ecology and the EnvironmentSame topicClimate change and permafrostFrench-language works237,207