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Record W2328975537 · doi:10.1021/es505443s

Biotic Ligand Model Does Not Predict the Bioavailability of Rare Earth Elements in the Presence of Organic Ligands

2015· article· en· W2328975537 on OpenAlexafffund
Chun‐Mei Zhao, Kevin J. Wilkinson

Bibliographic record

VenueEnvironmental Science & Technology · 2015
Typearticle
Languageen
FieldEarth and Planetary Sciences
TopicGeochemistry and Elemental Analysis
Canadian institutionsUniversité de Montréal
FundersNatural Sciences and Engineering Research Council of CanadaU.S. Bureau of Land Management
KeywordsBioavailabilityLigand (biochemistry)ChemistryEnvironmental chemistryBiotic Ligand ModelRare earthStereochemistryBiologyMineralogyBiochemistryDissolved organic carbonPharmacologyReceptor

Abstract

fetched live from OpenAlex

Due to their distinct physicochemical properties, rare earth elements (REEs) are critical to high-tech and clean-energy industries; however, their bioavailability is still largely unexplored. In this paper, the bioavailability of several REEs has been carefully examined for the freshwater alga, Chlamydomonas reinhardtii. In the presence of organic ligands (L), the biouptake of REEs was much higher than that predicted by the biotic ligand model (BLM). Enhancement of the biouptake flux was observed for six ligands (metal = thulium) and six REEs (ligand = citric acid), indicating that this could be a common feature for these metals. In order to explore the mechanism for the enhanced uptake, Tm internalization was carefully evaluated. The Tm internalization flux (Jint) followed first-order (Michaelis-Menten) kinetics with a calculated maximum internalization flux (Jmax) of (1.1 ± 0.08) × 10(-14) mol · cm(-2) · s(-1) and an affinity constant for the reaction of the metal with the transport sites (KTm-R) of 10(7.1) M(-1). In the presence of citric acid, malic acid, or NTA, the Jint for Tm was more than 1 order of magnitude higher than that predicted by the BLM when algae were exposed to a constant 10(-9) M Tm(3+). The bioavailability of the metal complexes could not be explained by a piggyback internalization (through an anion channel) or the contribution of labile complexes. The enhanced biouptake was attributed to the formation of a ternary Tm complex {L-Tm-R} at the metal transport site. In the natural environment where organic ligands are ubiquitous, classic models are unlikely to predict the bioavailability of REEs to aquatic organisms.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.010
Threshold uncertainty score0.019

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0010.001
Open science0.0010.000
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0010.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.009
GPT teacher head0.192
Teacher spread0.183 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations67
Published2015
Admission routes2
Has abstractyes

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