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Record W2330117037 · doi:10.1139/z2012-023

The cybrid invasion: widespread postglacial dispersal by<i>Phoxinus</i>(Pisces: Cyprinidae) cytoplasmic hybrids

2012· article· en· W2330117037 on OpenAlexaffvenueabout
Jonathan A. Mee, Eric B. Taylor

Bibliographic record

VenueCanadian Journal of Zoology · 2012
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenetic diversity and population structure
Canadian institutionsUniversity of British ColumbiaRoyal British Columbia Museum
Fundersnot available
KeywordsBiologyPhoxinusRefugium (fishkeeping)Biological dispersalMitochondrial DNALineage (genetic)IntrogressionEcologyPhylogeographyEvolutionary biologyGlacial periodZoologyCyprinidaePhylogeneticsGeneticsHabitatPopulationGenePaleontologyFishery

Abstract

fetched live from OpenAlex

Peculiar reproductive processes that arise during sperm-dependent asexual reproduction may have important roles in allowing coexistence of sperm-dependent asexuals and their sexually reproducing hosts. Though typically clonal, nonclonal reproduction in the hybrid gynogenetic species Phoxinus eos–neogaeus can reestablish sexual northern redbelly dace ( Phoxinus eos (Cope, 1861)) nuclear genomes. These hybrid-derived P. eos biotypes, known as cybrids, have finescale dace ( Phoxinus neogaeus Cope, 1867) mitochondria but are otherwise indistinguishable from “pure” P. eos. Our goal was to determine the extent of the cybrids’ distribution, and hence to evaluate their role in mechanisms of asexual–sexual coexistence. We also set out to determine the geographic origins of P. eos–neogaeus and cybrids. Our sampling revealed that all Phoxinus species and biotypes are widely distributed in North America, but that cybrids have replaced pure P. eos, or preempted postglacial colonization by pure P. eos, in the northern portion of their distribution. Also, all P. eos–neogaeus and cybrids had mitochondrial DNA (mtDNA) sequences closely related to a lineage originating from a Mississippi glacial refugium. No P. eos–neogaeus or cybrids were derived from a divergent P. neogaeus lineage discovered in Atlantic Canada. It is therefore unlikely that P. eos–neogaeus or cybrids originated in any Atlantic glacial refugia. If P. neogaeus mitochondria are better adapted to northern environments, widespread mtDNA introgression may facilitate coexistence in northern areas by reducing the disparity in fitness between P. eos–neogaeus and its sexual hosts.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.006
Threshold uncertainty score0.013

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0010.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.008
GPT teacher head0.205
Teacher spread0.197 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations27
Published2012
Admission routes3
Has abstractyes

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