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Record W2333478117 · doi:10.3934/mbe.2012.9.215

Longtime behavior of one-dimensional biofilm models with shear dependent detachment rates

2012· article· en· W2333478117 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.

Bibliographic record

VenueMathematical Biosciences & Engineering · 2012
Typearticle
Languageen
FieldEngineering
TopicSlime Mold and Myxomycetes Research
Canadian institutionsUniversity of Guelph
Fundersnot available
KeywordsHagen–Poiseuille equationBiofilmMechanicsFlow (mathematics)Couette flowReynolds numberVolumetric flow ratePressure dropShear stressShear (geology)MathematicsStatistical physicsMaterials sciencePhysicsTurbulenceGeologyComposite material

Abstract

fetched live from OpenAlex

We investigate the role of non shear stress and shear stressed based detachment rate functions for the longterm behavior of one-dimensional biofilm models. We find that the particular choice of a detachment rate function can affect the model prediction of persistence or washout of the biofilm. Moreover, by comparing biofilms in three settings: (i) Couette flow reactors, (ii) Poiseuille flow with fixed flow rate and (iii) Poiseuille flow with fixed pressure drop, we find that not only the bulk flow Reynolds number but also the particular mechanism driving the flow can play a crucial role for longterm behavior. We treat primarily the single species-case that can be analyzed with elementary ODE techniques. But we show also how the results, to some extent, can be carried over to multi-species biofilm models, and to biofilm models that are embedded in reactor mass balances.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.314
Threshold uncertainty score0.602

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.028
GPT teacher head0.253
Teacher spread0.225 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it