MétaCan
Menu
Back to cohort
Record W2353350990 · doi:10.2310/6650.2005.00006.107

108 A NOVEL COL1A1 MUTATION IN INFANTILE CORTICAL HYPEROSTOSIS (CAFFEY DISEASE) EXPANDS THE SPECTRUM OF COLLAGEN-RELATED DISORDERS

2005· article· en· W2353350990 on OpenAlexaff
Robert Gensure, Outi Mäkitie, Corlane Barclay, Catherine B. Chan, S. DePalmer, Murat Bastepe, H. Abuzahra, Richard Couper, Jonathan G. Seidman, WG Cole, Harald Jüppner

Bibliographic record

VenueJournal of Investigative Medicine · 2005
Typearticle
Languageen
FieldMedicine
TopicOsteomyelitis and Bone Disorders Research
Canadian institutionsHospital for Sick Children
Fundersnot available
KeywordsDentinogenesis imperfectaMissense mutationOsteogenesis imperfectaExonMutationGeneticsHyperostosisBiologyLocus (genetics)GeneAnatomy

Abstract

fetched live from OpenAlex

Infantile cortical hyperostosis (Caffey disease) is an autosomal dominant disorder characterized by episodes of localized rapid bone formation, which are usually limited to the first 2 years of life. We performed a genome-wide screen for genetic linkage in an affected family and mapped the genetic locus of Caffey disease to chromosome 17q21 (2-point LOD score: 6.78). Fourteen candidate genes within the linked region were sequenced. Affected individuals and obligate carriers were heterozygous for a missense mutation (3041C>T) in exon 42 of COL1A1, which was predicted to alter the amino acid sequence (R836C) of the triple helical domain of the α1(I) chain of type I collagen. The same mutation was identified in the affected members of an unrelated family with Caffey disease, and it occurred most likely as a de novo mutation in identical twins, each affected by this disorder. The mutation was not present in > 300 chromosomes from healthy individuals. Dermal fibroblast cultures from an affected individual showed abnormal disulfide-bonded dimeric α1(I) chains. Two-dimensional SDS-PAGE analysis showed that these dimers dissociated after reduction of disulfide bonds into α1(I)9 chains that likely contained the R836C mutation. Electron microscopic analysis of collagen fibrils from an affected individual showed decreased number of fibrils, increased variability of size and shape of fibrils, and increased material interspersed between fibrils. Mutations in COL1A1 have been previously shown to cause Ehlers-Danlos syndrome (EDS) and osteogenesis imperfecta; we therefore re-examined our patients for features of these disorders. Individuals with R836C mutation showed joint laxity, soft skin, and inguinal hernias, similar to EDS type III, while fracture rates were only 1.6 per patient and bone densitometry was normal. Our findings extend the spectrum of COL1A1-related diseases to include a hyperostotic disorder.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Case report · Consensus signal: Case report
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.007

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0010.000
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.029
GPT teacher head0.305
Teacher spread0.275 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designCase report
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations2
Published2005
Admission routes1
Has abstractyes

Explore more

Same venueJournal of Investigative MedicineSame topicOsteomyelitis and Bone Disorders ResearchFrench-language works237,207