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Record W2381015066

Condition optimization of real time PCR used in rapid detection of Penicillium expansum in apple juice concentrate

2007· article· en· W2381015066 on OpenAlexaff
Fan Ming-tao, BI Jing-ying, Linwei Liu

Bibliographic record

VenueJournal of Northwest A & F University · 2007
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicMolecular Biology Techniques and Applications
Canadian institutionsUniversity of Guelph
Fundersnot available
KeywordsPenicillium expansumPenicilliumPrimer (cosmetics)Food scienceMelting curve analysisBiologyPatulinReal-time polymerase chain reactionChemistryBotanyMycotoxinGeneBiochemistryPostharvest
DOInot available

Abstract

fetched live from OpenAlex

In order to to detect Penicillium expansum rapidly in apple juice concentration,the real time PCR method was used to detect Penicillium expansum and the conditions were also optimized.Based on the primers from polygatacturonase gene,the effect of annealing temperature,primer concentration and template concentration of real time PCR on the amplification was evaluated.The result showed that the amplification temperature of Penicillium expansum DNA was 61 ℃ when using Lightcycler,primer concentration was between 0.20-0.40 μmol/L,and the template concentration had little effect on amplification.Using above mentioned parameters,the best amplification,product melting curve and clear bands could be obtained.The parameters to detect Penicillium expansum obtained in this study can be used in the detection of Penicillium expansum in apple juice production,it can be also used as a reference for real time PCR detection for other microbes.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.072
Threshold uncertainty score0.280

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.005
GPT teacher head0.224
Teacher spread0.218 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2007
Admission routes1
Has abstractyes

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