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Record W2384993053

Identification of QTLs for Lignin Content of Seed Coat in Brassica napus L.in Different Environments

2011· article· en· W2384993053 on OpenAlexaff
QU Cun

Bibliographic record

VenueACTA AGRONOMICA SINICA · 2011
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenetic Mapping and Diversity in Plants and Animals
Canadian institutionsAgriculture and Agri-Food Canada
Fundersnot available
KeywordsQuantitative trait locusCoatBiologyPopulationBrassicaLigninCultivarHorticultureTaprootInbred strainSelfingTransgressive segregationBotanyAgronomyGeneGenetics
DOInot available

Abstract

fetched live from OpenAlex

The objective of this study was to identify QTLs for lignin content of seed coat in Brassica napus using the composite interval mapping (CIM) method. The recombinant inbred lines (RIL) population derived from a cross between black-seeded male parent cultivar Zhongyou 821 and yellow-seeded female parent line GH06 was established by selfing for seven successive generations with single seed propagating from F2. The population was grown at Beibei and Wanzhou in Chongqing in 2007. The QTLs of seed coat lignin content in two environments were detected using the genetic map constructed in 2007. A total of 12 QTLs for seed coat lignin content were located on the four linkage groups, each of them explained 4.50–8.79% of phenotypic variation. One QTL located on linkage group (LG) 3 was linked with the same marker EM19ME23/130 in two environments, other QTLs had different locations between two environments. The QTLs found in Beibei were mainly distributed on LG 20, and the QTLs detected in Wanzhou mainly distributed on LG 3. The QTLs for flavoid contents in embryo and seed color were located in the nearly region with some QTLs for seed coat lignin content. The correlation analysis showed the lignin content of seed coat had significantly and positively correlated with flavoid content of embryo in different environments. In conclution, (1) the seed coat lignin content is controlled by many minor-effect genes, with a genetic pattern of quantitative trait, and the expression of the QTL is affected by environmental factors greatly;(2) the syntheses of lignin in seed coat and flavoid of embryo are probably controlled by the same genes or have the same pathway partially.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.344
Threshold uncertainty score0.340

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.042
GPT teacher head0.225
Teacher spread0.183 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2011
Admission routes1
Has abstractyes

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