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Record W2403493353 · doi:10.1016/j.cub.2016.04.038

Expansion of Signal Transduction Pathways in Fungi by Extensive Genome Duplication

2016· article· en· W2403493353 on OpenAlexaff
Luis M. Corrochano, Alan Kuo, Marina Marcet‐Houben, Silvia Polaino, Asaf Salamov, José Manuel Villalobos‐Escobedo, Jane Grimwood, María‐Isabel Álvarez, Javier Ávalos, Diane Bauer, Ernesto P. Benito, Isabelle Benoit, Gertraud Burger, Lola P. Camino, David Cánovas, Enrique Cerdá‐Olmedo, Jan‐Fang Cheng, Ángel Domínguez, Marek Eliáš, Arturo P. Eslava, Fabian Glaser, Gabriel Gutiérrez, Joseph Heitman, Bernard Henrissat, Enrique A. Iturriaga, B. Franz Lang, José Luis Lavín, Soo Chan Lee, Wenjun Li, Erika Lindquist, Sergio López‐García, Eva M. Luque, Ana T. Marcos, Joel Martin, Kevin McCluskey, Humberto R. Medina, Alejandro Miralles-Durán, Atsushi Miyazaki, Elisa Muñoz-Torres, José A. Oguiza, Robin A. Ohm, María Olmedo, Margarita Orejas, Lucila Ortiz‐Castellanos, Antonio G. Pisabarro, Julio Rodríguez‐Romero, José Ruíz-Herrera, Rosa M. Ruiz‐Vázquez, Catalina Sanz, Wendy Schackwitz, Mahdi Shahriari, Ekaterina Shelest, Fátima Silva-Franco, Darren M. Soanes, Khajamohiddin Syed, Víctor G. Tagua, Nicholas J. Talbot, Michael R. Thon, Hope Tice, Ronald P. de Vries, Ad Wiebenga, Jagjit S. Yadav, Edward L. Braun, Scott Baker, Victoriano Garre, Jeremy Schmutz, Benjamin A. Horwitz, Santiago Torres-Martínez, Alexander Idnurm, Alfredo Herrera‐Estrella, Toni Gabaldón, Igor V. Grigoriev

Bibliographic record

VenueCurrent Biology · 2016
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicFungal and yeast genetics research
Canadian institutionsUniversité de Montréal
FundersNational Institute of Allergy and Infectious DiseasesEuropean Regional Development FundOffice of ScienceBiotechnology and Biological Sciences Research CouncilGrantová Agentura České RepublikyJunta de AndalucíaNational Science FoundationMinisterio de Economía y CompetitividadJoint Genome InstituteU.S. Department of Energy
KeywordsBiologyGene duplicationSignal transductionGenomeGeneticsComputational biologyTransduction (biophysics)Cell biologyEvolutionary biologyGeneBotany

Abstract

fetched live from OpenAlex
No abstract in any covered source. Its absence is recorded, not treated as a negative.

No abstract. This is not a gap in this database; OpenAlex has none either. 23.3% of the frame is in this state, and the screen finds HALF as much metaresearch here, so the absence is a measured bias rather than a missing field.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.005

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0010.001
Open science0.0000.001
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.026
GPT teacher head0.288
Teacher spread0.262 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations203
Published2016
Admission routes1
Has abstractno

Explore more

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