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Record W2408054460 · doi:10.25439/rmt.27580230

Studies on the effect of thymoquinone on oxidative stress and cell wall integrity of Candida glabrata

2016· dissertation· en· W2408054460 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

aboutThe title or abstract carries a Canadian signal from the geographic lexicon.
no affNo Canadian affiliation: this work is invisible to an affiliation-only frame.
No Canadian affiliation. An affiliation-only frame, the usual design, would never have seen this work. It is one of the works that make the case for inverting the frame.

Bibliographic record

VenueRMIT Research Repository (RMIT University Library) · 2016
Typedissertation
Languageen
FieldMedicine
TopicNigella sativa pharmacological applications
Canadian institutionsnot available
Fundersnot available
KeywordsThymoquinoneOxidative stressCandida glabrataMicrobiologyChemistryBiologyCandida albicansBiochemistryAntioxidant

Abstract

fetched live from OpenAlex

Thymoquinone is a major active ingredient of black seeds which are produced by the plant, Nigella sativa. Thymoquinone exhibits various chemotherapeutic and chemo-preventative activities including immunostimulation, antimicrobial, anticancer and chemoprotection activities (reviewed by Darakhshan et al., 2015). Despite available data on thymoquinone’s anticancer mechanism of action, there is no description of its antifungal mode of action. This thesis presents data on thymoquinone’s effect on the redox status of C. glabrata and reveals a binding site of TQ on the surface of these cells.<br><br>The data presented in chapter 2 demonstrates for the first time the growth inhibitory effect of TQ on the species C. krusei and C. glabrata beside other Candida species. This chapter also shows that in C. glabrata, thymoquinone exhibited concentration-dependent fungicidal activity on planktonic cells and caused necrotic death. In addition, the antifungal effect of thymoquinone against C. glabrata biofilms was examined. The biofilms were stabilised using a poly propylene biofilm reactor designed to mimic Calgary biofilm device (Almshawit et al., 2014b). The advantages of this novel reactor are described.<br>Thymoquinone may act as anti-oxidant or pro-oxidant depending on the milieu (Mansour et al., 2002). Chapter 3 demonstrated that thymoquinone causes oxidative stress in C. glabrata as a result of increased reactive oxygen species generation. This chapter also reports depletion of reduced glutathione levels and reduced mitochondrial membrane potential. In addition, this chapter provides experimental characterisation of the ALO1 gene and evidence of production of D-erythroascorbic acid by C. glabrata.<br><br>Chapter 4 shows that activation of CWI-MAPK in C. glabrata results following treatment with thymoquinone, hydrogen peroxide, doxycycline or hypo-osmotic treatment. However, CWI-MAPK mutants were neither sensitive nor resistant to thymoquinone. In contrast the downstream kinase mutant (C. glabrata Δslt2) was sensitive to H2O2 (Chapter 5). Activation of CWI-MAPK by hypo-osmolarity was exploited to develop a hypothesis that this mechanism could be used to screen potential CWI-MAPK inhibitors. Survival of cells in water was used as a model to screen such inhibitor. The results give insights into important facts that should be considered when using water suspensions of C. glabrata cells.<br><br>Finally chapter 5 describes for the first time an interaction between thymoquinone and the fungal cell wall. This study demonstrates that thymoquinone induced stress promotes chitin synthesis after induction of CWI-MAPK. Chitin was shown to bind thymoquinone and facilitate its transport through the cell wall inside the cell. This was supported by the observation that inhibition of chitin synthesis led to a decrease in thymoquinone antifungal efficacy. This finding is important in a reconsideration of the use of TQ together with other cell wall active antifungal compounds such as nikkomycin Z.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.202
Threshold uncertainty score0.765

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.001
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.040
GPT teacher head0.336
Teacher spread0.295 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it