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Record W2408276338 · doi:10.1385/1-59259-799-8:159

DNA Adducts With Chlorophyll and Chlorophyllin As Antimutagenic Agents: Synthesis, Stability, and Structural Features

2004· article· en· W2408276338 on OpenAlexaff
Heidar‐Ali Tajmir‐Riahi, Jean-François Neault, S. Diamantoglou

Bibliographic record

VenueHumana Press eBooks · 2004
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicDNA and Nucleic Acid Chemistry
Canadian institutionsUniversité du Québec à Trois-Rivières
Fundersnot available
KeywordsChlorophyllinDNAPigmentChemistryFourier transform infrared spectroscopyChlorophyllAqueous solutionAdductBinding constantChlorophyll aNuclear chemistryPhotochemistryBiochemistryBinding siteOrganic chemistryChemical engineering

Abstract

fetched live from OpenAlex

Porphyrins and their metal derivatives are strong DNA binders with association constants of 105 M −1 to 107 M −1. Some of these compounds have been used for radiation sensitization therapy of cancer and are targeted to interact with cellular DNA. Chlorophyll (CHL) and chlorophyllin (CHLN), a food-grade derivative of chlorophyll, the ubiquitous green plant pigment widely consumed by humans, are potent inhibitors of experimental carcinogenesis. The aim of this report was to examine the interaction of calf-thymus DNA with CHL and CHLN in aqueous solution at physiological pH, with pigment/DNA(phosphate) molar ratios (r) of 1/80 to 1/2. Fourier transform infrared (FTIR) difference spectroscopic method was used to determine the pigment binding mode, binding constant, sequence selectivity, DNA secondary structure and structural variations of the pigment-DNA complexes in aqueous solution. Spectroscopic evidence showed that chlorophyll is an external DNA binder with no affinity toward DNA intercalation. CHL bindings are through the backbone PO2 group and the guanine N-7 site of the G-C base pair (major groove) with overall binding constant of K=1.13×104 M −1 CHLN binds DNA via intercalative mode into the G-C and A-T-rich regions with a minor perturbation of the backbone PO2 group with overall binding constant K=3.56×103 M −1. However, The CHL distributions are 60% with the backbone PO2 group and 20% with the G-C base pairs, whereas CHLN intercalation is 25% with A-T and 15% with G-C base pairs. A partial reduction of B-DNA structure in favor of A-DNA occurs upon CHL and CHLN complexation.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.009
Threshold uncertainty score0.926

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.015
GPT teacher head0.235
Teacher spread0.221 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations15
Published2004
Admission routes1
Has abstractyes

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