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Record W2419179490 · doi:10.1177/135965350300800511

HIV Lipodystrophy Case Definition using Artificial Neural Network Modelling

2003· article· en· W2419179490 on OpenAlexaff
John P. A. Ioannidis, Thomas A Trikalinos, Matthew Law, Andrew Carr, Dale J. Barr, DA Cooper, Sean Emery, Steven Grinspoon, R. Lewis, Kenneth Lichtenstein, Justine Murray, Daniela Pizzuti, William G. Powderly, Willy Rozenbaum, Morris Schambelan, Rebekah Puls, Antonia L. Moore, J. Philip Miller, WH Belloso, SA Ivalo, LO Clara, LA Barcan, LD Stern, AM Galich, MI Perman, Marcelo Losso, Adriana Durán, Javier Toibaro, David Baker, Ronald D. Vale, Robert McFarlane, Haley MacLeod, J Kidd, B Genn, Robert J Fielden, S. Mallal, Martyn A. French, Alan Cain, J. Skett, Donald M. Maxwell, Anne Mijch, Jennifer Hoy, Anna Pierce, C Mccormick, B. de Graaf, Julian Falutz, J Vatistas, L Dion, Julio Montaner, Marianne Harris, Peter Phillips, V. Montessori, Monica Valyi, Walter F. Stewart, Sharon Walmsley, L Casciaro, Jens Lundgren, Ove Andersen, A Gronholdt, I. Béguinot, P. Mercié, Geneviève Chêne, J. Reynes, Laurent Cotte, Lella Naït‐Ighil, Laurence Slama, TH Nguyen, Christophe Rousselle, Viard Jp, Laurent Roudière, Aurélie Maignan, Marianne Burgard, Stefan Mauss, Guenther Schmutz, Saskia Scholten, Shinichi Oka, Hamish Fraser, Masayuki Ishihara, Kazuko Itoh, P Reiss, Marc van der Valk, P Leunissen, M A F Nievaard, Berthe van Eck-Smit, C can Kujik, Nicholas I. Paton, Béatrice Peperstraete, Farina Karim, Chamroeun Khim, Sean Wei Xiang Ong, José M. Gatell, Estebán Martínez, Ana Milinkovic, Duncan Churchill, C Timaeus, Toby M. Maher, Nancy E. Perry, A. J. Bray, Graeme Moyle, Christine Baldwin, Christopher Higgs, B Reynolds, Charles C. J. Carpenter, Linda Bausserman, T Fiore, Melissa DiSpigno, C Cohen, James Hellinger, Karlissa Foy, S Hubka, Brett E. Riccio, Wafaa El‐Sadr, S. Raghavan, N Chowdury, Bert de Vries, Stephen P. Miller, S. Hammer, Matthew M. Crawford, Stanley Chang, J Dobkin, Bianca Quagliarello, Dympna Gallagher, Mark Punyanitya, Harold A. Kessler, A. Tenorio, Siri L. Kjos, Judith Falloon, HC Lane, Donald Rock, Linda A. Ehler, Todd McClain, Robert L. Murphy, P Milne, Judith A. Aberg, Michael K. Klebert, Michael Conklin, Derek Ward, L Green, B Stearn

Bibliographic record

VenueAntiviral Therapy · 2003
Typearticle
Languageen
FieldMedicine
TopicHIV-related health complications and treatments
Canadian institutionsToronto General HospitalToronto Western HospitalSt. Paul's HospitalMontreal General Hospital
Fundersnot available
KeywordsLogistic regressionLipodystrophyArtificial neural networkRegression analysisRegressionStatisticsArtificial intelligenceMachine learningComputer scienceMedicineHuman immunodeficiency virus (HIV)MathematicsAntiretroviral therapy

Abstract

fetched live from OpenAlex

OBJECTIVE: A case definition of HIV lipodystrophy has recently been developed from a combination of clinical, metabolic and imaging/body composition variables using logistic regression methods. We aimed to evaluate whether artificial neural networks could improve the diagnostic accuracy. METHODS: The database of the case-control Lipodystrophy Case Definition Study was split into 504 subjects (265 with and 239 without lipodystrophy) used for training and 284 independent subjects (152 with and 132 without lipodystrophy) used for validation. Back-propagation neural networks with one or two middle layers were trained and validated. Results were compared against logistic regression models using the same information. RESULTS: Neural networks using clinical variables only (41 items) achieved consistently superior performance than logistic regression in terms of specificity, overall accuracy and area under the ROC curve. Their average sensitivity and specificity were 72.4 and 71.2%, as compared with 73.0 and 62.9% for logistic regression, respectively (area under the ROC curve, 0.784 vs 0.748). The discriminating performance of the neural networks was largely unaffected when built excluding 13 parameters that patients may not have readily available. The average sensitivity and specificity of the neural networks remained the same when metabolic variables were also considered (total 60 items) without a clear advantage against logistic regression (overall accuracy 71.8%). The performance of networks considering also body composition variables was similar to that of logistic regression (overall accuracy 78.5% for both). CONCLUSIONS: Neural networks may offer a means to improve the discriminating performance for HIV lipodystrophy, when only clinical data are available and a rapid approximate diagnostic decision is needed. In this context, information on metabolic parameters is apparently not helpful in improving the diagnosis of HIV lipodystrophy, unless imaging and body composition studies are also obtained.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.003
metaresearch head score (Gemma)0.008
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: Simulation or modeling
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.005
Threshold uncertainty score0.014

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0030.008
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0020.001
Science and technology studies0.0000.000
Scholarly communication0.0010.001
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.115
GPT teacher head0.331
Teacher spread0.216 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations12
Published2003
Admission routes1
Has abstractyes

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