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Record W2439249045 · doi:10.1093/jpids/piv078

Time to Positivity of Blood Cultures in Infants 0 to 90 Days Old Presenting to the Emergency Department: Is 36 Hours Enough?

2015· article· en· W2439249045 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.

Bibliographic record

VenueJournal of the Pediatric Infectious Diseases Society · 2015
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicBacterial Identification and Susceptibility Testing
Canadian institutionsUniversité de MontréalCentre Hospitalier Universitaire Sainte-Justine
Fundersnot available
KeywordsMedicineBlood cultureBacteremiaEmergency departmentIncubation periodClinical microbiologyGram stainingEmergency medicinePediatricsIncubationMicrobiologyAntibioticsBiology

Abstract

fetched live from OpenAlex

BACKGROUND: Continuous monitoring blood culture systems (CMBCS) now allow for more rapid detection of microbial growth. We aimed to determine whether a 36-hour period was sufficient to detect all blood cultures positive for pathogenic bacteria in infants 0 to 90 days old undergoing a septic workup in the emergency department of a tertiary care pediatric center. METHODS: We performed a retrospective study of all positive blood cultures collected in these infants over a 5-year time period (from March 13, 2008 to July 29, 2013). Bottles were incubated in a CMBCS. The time to positivity (TTP) was calculated from time of blood culture registration into the laboratory system to time of Gram stain. Medical charts were reviewed for relevant clinical information. Cultures were classified as pathogenic or contaminant using microorganism type and clinical presentation. RESULTS: Three thousand five hundred fifty-nine blood cultures were collected. Of these, 98 (2.8%) were positive. Fifty-two (53.1%) were deemed pathogenic and 46 (46.9%) were deemed contaminant, for a true prevalence of bacteremia of 1.5%. At 24, 36, 48, and 50 hours, 87.8% (86 of 98), 96.9% (95 of 98), 99% (97 of 98), and 100% (98 of 98) of all cultures were positive. Considering only pathogenic organisms, 96.1% (50 of 52) and 100% (52 of 52) were positive at 24 and 36 hours. Mean TTP for pathogens and contaminants was 14.40 and 23.18 hours, respectively (P < .001). CONCLUSIONS: An incubation period of 36 hours is sufficient to detect 100% of blood cultures positive for a pathogenic organism in our population.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.095
Threshold uncertainty score0.325

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.009
GPT teacher head0.263
Teacher spread0.254 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it