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Record W2462104102 · doi:10.5539/jfr.v5n4p65

Phenotypic and Genotypic Characterization of Cronobacter isolated from Powdered Infant Formula Retailed in Nigeria

2016· article· en· W2462104102 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

venuePublished in a venue whose home country is Canada.
no affNo Canadian affiliation: this work is invisible to an affiliation-only frame.
No Canadian affiliation. An affiliation-only frame, the usual design, would never have seen this work. It is one of the works that make the case for inverting the frame.

Bibliographic record

VenueJournal of Food Research · 2016
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicEnterobacteriaceae and Cronobacter Research
Canadian institutionsnot available
Fundersnot available
KeywordsCronobacter sakazakiiCronobacterEnterobacterGenotypeMultilocus sequence typingMicrobiologyBiologyInfant formulaTypingGeneticsEscherichia coliFood scienceGene

Abstract

fetched live from OpenAlex

<p><em>Cronobacter</em> is a genus with emerging pathogens that has been associated with life threatening diseases in neonates, infants and immunocompromised adults. Three <em>Cronobacter </em>species were isolated from powdered infant formula retailed in Nigeria. Different methods of phenotypic and genotypic characterization were carried out. All the isolates were identified biochemically by Microscan identification analysis as <em>Enterobacter sakazakii</em> (98.87%)<em>. </em>The Vitek MALDI-TOF system identified the isolates as <em>Cronobacter sakazakii.</em> 16S rRNA sequencing identified the isolates as <em>C. sakazakii. </em>In contrast the use of species-specific PCR assays targeting <em>rpo</em>B<em>, </em>and<em> cgc</em>A<em>, </em>helped to identify two of the three strains as<em> C. sakazakii </em>and the last strain was identified as<em> C. malonaticus. </em>Multi locus sequence typing (MLST) analysis was used to identify each strain’s sequence type and the results identified three new sequence types: 303, 304 and 296. <em>C. sakazakii</em> BAA 894 served as a positive control for all the experiments. Biochemical methods and commercial identification systems are not sensitive enough to identify <em>Cronobacter </em>strains to the species level. Molecular methods are needed to confirm the species identity of strains.</p>

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.229
Threshold uncertainty score0.340

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.024
GPT teacher head0.297
Teacher spread0.274 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it